RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 GRID2O43424 1007 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PENKP01210 267 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 MYBL1P10243 752 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 GZMAP12544 262 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PSMA2P25787 234 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 HOXC13P31276 330 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PTPN9P43378 593 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 MTNR1AP48039 350 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CXCR3P49682 368 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PDLIM4P50479 330 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CLCN5P51795 746 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 GALCP54803 685 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 HDAC4P56524 1084 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 GRSF1Q12849 480 aaKnown RBP eCLIP4.38□□□□□ -1.71
PMS1-202ENST00000374826 MAMLD1Q13495 774 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 EIF4EBP2Q13542 120 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 CDH18Q13634 790 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SLC18A3Q16572 532 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 MPPE1Q53F39 396 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 MS4A13Q5J8X5 152 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 BRMS1LQ5PSV4 323 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PPP1R2P3Q6NXS1 205 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SCYL2Q6P3W7 929 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 TSSK4Q6SA08 328 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CREB3L2Q70SY1 520 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 ARCQ7LC44 396 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 FJX1Q86VR8 437 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 MFN1Q8IWA4 741 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 GALNT15Q8N3T1 639 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CARNMT1Q8N4J0 409 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CCDC185Q8N715 623 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 TEX45Q8NA69 505 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 HJURPQ8NCD3 748 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 RPLP0P6Q8NHW5 317 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 THAP4Q8WY91 577 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 IGSF8Q969P0 613 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 NT5C3BQ969T7 300 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CLDN23Q96B33 292 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SDCCAG3Q96C92 435 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PGAP3Q96FM1 320 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 WBP1Q96G27 269 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 MSANTD3Q96H12 275 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 BTN2A3PQ96KV6 586 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CCDC42Q96M95 316 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 RPRD1AQ96P16 312 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 XPO6Q96QU8 1125 aaKnown RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 PEBP4Q96S96 227 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CNPY3Q9BT09 278 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 NUP85Q9BW27 656 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CXorf56Q9H5V9 222 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 NHEJ1Q9H9Q4 299 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 GRPEL1Q9HAV7 217 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PARVAQ9NVD7 372 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 GPATCH2LQ9NWQ4 482 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 ARHGEF38Q9NXL2 777 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 RRN3Q9NYV6 651 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 DLGAP2Q9P1A6 1054 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 DEC1Q9P2X7 70 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 ANAPC7Q9UJX3 599 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 STOML2Q9UJZ1 356 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 VANGL2Q9ULK5 521 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 TFR2Q9UP52 801 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SCINQ9Y6U3 715 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PIEZO1Q92508 2521 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SPTBN4Q9H254 2564 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SPTBN2O15020 2390 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 RP1P56715 2156 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 PCDH15Q96QU1 1955 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 A0A096LPK6 155 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 A0A1B0GVM2 712 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 E9PAM4 449 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 H0Y626 953 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 K7EQS6 105 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 NCAM2O15394 837 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 FAM155BO75949 473 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 LUC7L3O95232 432 aaKnown RBP4.37□□□□□ -1.71
PMS1-202ENST00000374826 KLF8O95600 359 aaPredicted RBP4.37□□□□□ -1.71
PMS1-202ENST00000374826 F9P00740 461 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 H2AFZP0C0S5 128 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 SLC2A3P11169 496 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 CKMT1AP12532 417 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 TCF4P15884 667 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 DESP17661 470 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 HLA-FP30511 346 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 CD70P32970 193 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 EIF2DP41214 584 aaKnown RBP4.37□□□□□ -1.71
PMS1-202ENST00000374826 SEC61A1P61619 476 aaKnown RBP4.37□□□□□ -1.71
PMS1-202ENST00000374826 FUT11Q495W5 492 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 ALFQ53S48 1182 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 RABGAP1LQ5R372 815 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 FBXL22Q6P050 247 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 RAD9BQ6WBX8 426 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 H2AFVQ71UI9 128 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 STRADAQ7RTN6 431 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 BNIPLQ7Z465 357 aa4.37□□□□□ -1.71
PMS1-202ENST00000374826 CACUL1Q86Y37 369 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms