RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MTAPQ13126 283 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 FZD2Q14332 565 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 UGT8Q16880 541 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 MSRB3Q8IXL7 192 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PHACTR4Q8IZ21 702 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 WDR48Q8TAF3 677 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 GPBAR1Q8TDU6 330 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 SNX19Q92543 992 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 GFM2Q969S9 779 aaKnown RBP16.83■□□□□ 0.28
SSBP3-203ENST00000371319 CLDN23Q96B33 292 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PPM1MQ96MI6 270 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 SLC6A18Q96N87 628 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PITHD1Q9GZP4 211 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-203ENST00000371319 PRM3Q9NNZ6 103 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 SERHLQ9NQF3 203 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 ADGRE2Q9UHX3 823 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 KLF15Q9UIH9 416 aa16.83■□□□□ 0.28
SSBP3-203ENST00000371319 TRBV5-3A0A0A0MS03 114 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SPTY2D1-AS1A0A0U1RR47 76 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 FEZF1A0PJY2 475 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SAP18O00422 153 aaKnown RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 PCDH7O60245 1069 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 C8BP07358 591 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 ANXA4P09525 319 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 F3P13726 295 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 HOXB9P17482 250 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 NDUFS1P28331 727 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SLC19A1P41440 591 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 MRPS22P82650 360 aaKnown RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 LIPEQ05469 1076 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 PGS1Q32NB8 556 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 PRPF38BQ5VTL8 546 aaKnown RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 LRRC74BQ6ZQY2 392 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 MSANTD1Q6ZTZ1 278 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 COMMD6Q7Z4G1 85 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 METTL4Q8N3J2 472 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SPEM1Q8N4L4 309 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 OR7A2PQ8NGA2 310 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 PAIP1Q9H074 479 aaKnown RBP16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SLC6A20Q9NP91 592 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 SPHK1Q9NYA1 384 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 VAPAQ9P0L0 249 aa16.82■□□□□ 0.28
SSBP3-203ENST00000371319 TRBV23OR9-2A0A075B6M9 112 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 KDM1AO60341 852 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 BAG2O95816 211 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 B3GALT4O96024 378 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ATP6V1B2P21281 511 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 PTX3P26022 381 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SERPINB1P30740 379 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ASMTP46597 345 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 WNT3P56703 355 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ILF3Q12906 894 aaKnown RBP eCLIP16.81■□□□□ 0.282e-9■□□□□ 9
SSBP3-203ENST00000371319 BNIP2Q12982 314 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 LRIF1Q5T3J3 769 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 OR4F3Q6IEY1 312 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 FAM20CQ8IXL6 584 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 OR8J3Q8NGG0 315 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 CXorf40BQ96DE9 158 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ANKRD27Q96NW4 1050 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 MS4A8Q9BY19 250 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SLC25A37Q9NYZ2 338 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 A0A096LPI6 279 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 TCRBV3S1A0A5B6 114 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 METTL12A8MUP2 240 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SCAMP2O15127 329 aaKnown RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 CELA2BP08218 269 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SHMT2P34897 504 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 HNRNPFP52597 415 aaKnown RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ABATP80404 500 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 DPY19L1Q2PZI1 675 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 HKDC1Q2TB90 917 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 GTDC1Q4AE62 458 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 RUNDC3AQ59EK9 446 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SLC9B2Q86UD5 537 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SPATA24Q86W54 205 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 AMIGO1Q86WK6 493 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 DHFR2Q86XF0 187 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 GJD3Q8N144 294 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 DEFB119Q8N690 84 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 PJA1Q8NG27 643 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 DNAJB8Q8NHS0 232 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 CDC26Q8NHZ8 85 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.81■□□□□ 0.287e-6■■■■□ 22
SSBP3-203ENST00000371319 FAM174AQ8TBP5 190 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ZUFSPQ96AP4 578 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 KLHDC7BQ96G42 594 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ITCHQ96J02 903 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 TACO1Q9BSH4 297 aaKnown RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 INPP5KQ9BT40 448 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 TWSG1Q9GZX9 223 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 ALG2Q9H553 416 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 RMND5AQ9H871 391 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 MRPS30Q9NP92 439 aaKnown RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 SLC6A13Q9NSD5 602 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 EXO1Q9UQ84 846 aaKnown RBP16.81■□□□□ 0.28
SSBP3-203ENST00000371319 INVSQ9Y283 1065 aa16.81■□□□□ 0.28
SSBP3-203ENST00000371319 HEATR5BQ9P2D3 2071 aa16.8■□□□□ 0.28
SSBP3-203ENST00000371319 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
SSBP3-203ENST00000371319 LCMT2O60294 686 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms