RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HNRNPCL1O60812 293 aaKnown RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 EGFP01133 1207 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 DNTTP04053 509 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CSTBP04080 98 aaKnown RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 SERPINA6P08185 405 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ENO2P09104 434 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 MPC1LP0DKB6 136 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CCR7P32248 378 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 GPR1P46091 355 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ATXN3P54252 364 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 TMEM115Q12893 351 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 BNIP1Q12981 228 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 SP140Q13342 867 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CCDC6Q16204 474 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 PPP1R3AQ16821 1122 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 TTC31Q49AM3 519 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 ACSBG2Q5FVE4 666 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CDKL4Q5MAI5 379 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 SH2D4BQ5SQS7 431 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 METTL2BQ6P1Q9 378 aaKnown RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 SBSNQ6UWP8 590 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ATG14Q6ZNE5 492 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 NEK10Q6ZWH5 1172 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CUZD1Q86UP6 607 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 SYTL1Q8IYJ3 562 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 PDPRQ8NCN5 879 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ZNF514Q96K75 400 aaPredicted RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 COG4Q9H9E3 785 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 RDH14Q9HBH5 336 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 SAR1AQ9NR31 198 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 CD274Q9NZQ7 290 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 IKZF3Q9UKT9 509 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 RAXQ9Y2V3 346 aa8.49□□□□□ -1.05
TPM3-213ENST00000368545 RRP15Q9Y3B9 282 aaKnown RBP8.49□□□□□ -1.05
TPM3-213ENST00000368545 CYSRT1A8MQ03 144 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 PLK4O00444 970 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ZNF195O14628 629 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 TM7SF2O76062 418 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 KLF8O95600 359 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 MLYCDO95822 493 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 SOD1P00441 154 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 C8GP07360 202 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 RPS17P08708 135 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 VCLP18206 1134 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 CD72P21854 359 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 TACR1P25103 407 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 TEAD1P28347 426 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 EEF1DP29692 281 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 CORO7P57737 925 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 RPS14P62263 151 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 BCL7AQ4VC05 210 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 UNC50Q53HI1 259 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 METTL21CQ5VZV1 264 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 EPGNQ6UW88 154 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ZNF574Q6ZN55 896 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 DET1Q7L5Y6 550 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 MAVSQ7Z434 540 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 SLCO6A1Q86UG4 719 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ASZ1Q8WWH4 475 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 EBF4Q9BQW3 602 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 MRGBPQ9NV56 204 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 GRHPRQ9UBQ7 328 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ZDHHC2Q9UIJ5 367 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 SCOCQ9UIL1 159 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 STK38LQ9Y2H1 464 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ATG2BQ96BY7 2078 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 PABPN1LA6NDY0 278 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 ANTXRLA6NF34 631 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 NCF1BA6NI72 391 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 NCF1CA8MVU1 366 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 SLC16A5O15375 505 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 FFAR2O15552 330 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 PLRG1O43660 514 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 SGTAO43765 313 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 VEGFDO43915 354 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 DIAPH2O60879 1101 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ADAM23O75077 832 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 MTX2O75431 263 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 UNC5CO95185 931 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 NCF1P14598 390 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 TAS2R38P59533 333 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 CDKL1Q00532 357 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 LCP2Q13094 533 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 BOP1Q14137 746 aaKnown RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 DUOXA1Q1HG43 343 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 EOGTQ5NDL2 527 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 KIAA1161Q6NSJ0 714 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.48□□□□□ -1.05
TPM3-213ENST00000368545 SYT12Q8IV01 421 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 CHCHD4Q8N4Q1 142 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 AGR3Q8TD06 166 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ELMO1Q92556 727 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 NXPE2Q96DL1 559 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 CCM2Q9BSQ5 444 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms