RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C12orf56Q8IXR9 622 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 OR2AJ1Q8NGZ0 328 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 LILRB4Q8NHJ6 448 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PIWIL2Q8TC59 973 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ASB15Q8WXK1 588 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 DGAT2Q96PD7 388 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 CPEB1Q9BZB8 566 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MID1IP1Q9NPA3 183 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 FAM198AQ9UFP1 575 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MKLN1Q9UL63 735 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PHF24Q9UPV7 400 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 IRGMA1A4Y4 181 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 HOXB6P17509 224 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TACR2P21452 398 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SERPINF1P36955 418 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MEF2AQ02078 507 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF234Q14588 700 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 LACTB2Q53H82 288 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 GRTP1Q5TC63 336 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SLC30A6Q6NXT4 461 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TAPT1Q6NXT6 567 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF621Q6ZSS3 439 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ADGRG6Q86SQ4 1221 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 NATD1Q8N6N6 113 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PHF21BQ96EK2 531 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 LIN37Q96GY3 246 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TM9SF2Q99805 663 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF416Q9BWM5 594 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SEMA4CQ9C0C4 833 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 CST11Q9H112 138 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 NDRG3Q9UGV2 375 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PRPF19Q9UMS4 504 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 AFDNP55196 1824 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 DIDO1Q9BTC0 2240 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 MARF1Q9Y4F3 1742 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 GJE1A6NN92 205 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 BCAT2O15382 392 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SEC22BO75396 215 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 CDH1P12830 882 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ADRA1DP25100 572 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 S100A7P31151 101 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 CCR10P46092 362 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF41P51814 821 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 FGL1Q08830 312 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 GALEQ14376 348 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 MTX3Q5HYI7 312 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 METTL11BQ5VVY1 283 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 DAW1Q8N136 415 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 HM13Q8TCT9 377 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 EXOSC8Q96B26 276 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 LRIG1Q96JA1 1093 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 TPSD1Q9BZJ3 242 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SDHAF2Q9NX18 166 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SEC14L4Q9UDX3 406 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 A0A1B0GVG6 124 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PI15O43692 258 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 C8GP07360 202 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 S100PP25815 95 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 CDC34P49427 236 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 RPL14P50914 215 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 IQCCQ4KMZ1 466 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 AFMIDQ63HM1 303 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PRSS55Q6UWB4 352 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 B3GNT9Q6UX72 402 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ZER1Q7Z7L7 766 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 IQCHQ86VS3 1027 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SPATA6LQ8N4H0 392 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 BPIFCQ8NFQ6 507 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 C1GALT1C1Q96EU7 318 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 QRSL1Q9H0R6 528 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PCDHB1Q9Y5F3 818 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 A0A0U1RQF3 1178 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 DHRS12A0PJE2 317 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 MID1O15344 667 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 PAPSS2O95340 614 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 NDUFV2P19404 249 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 RARRES1P49788 294 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 NFATC2Q13469 925 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 LARS2Q15031 903 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 CCL14Q16627 93 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 C2orf76Q3KRA6 126 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 GPAT3Q53EU6 434 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 C9orf64Q5T6V5 341 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms