RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SLC30A3Q99726 388 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 EBNA1BP2Q99848 306 aaKnown RBP19.94■□□□□ 0.78
CD47-202ENST00000361309 HES7Q9BYE0 225 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 KCNK13Q9HB14 408 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 KLHL1Q9NR64 748 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 C19orf25Q9UFG5 118 aaPredicted RBP19.94■□□□□ 0.78
CD47-202ENST00000361309 SOX13Q9UN79 622 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 PCDHGB6Q9Y5F9 930 aa19.94■□□□□ 0.78
CD47-202ENST00000361309 C19orf84I3L1E1 186 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 NSA2O95478 260 aaKnown RBP19.93■□□□□ 0.78
CD47-202ENST00000361309 OGNP20774 298 aaKnown RBP19.93■□□□□ 0.78
CD47-202ENST00000361309 AGAP20933 346 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 CLCN7P51798 805 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 SMSP52788 366 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 TUBA3CQ13748 450 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 SIX1Q15475 284 aaPredicted RBP19.93■□□□□ 0.78
CD47-202ENST00000361309 CDSNQ15517 529 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 CCNG2Q16589 344 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 THEMIS2Q5TEJ8 643 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 TUBA3EQ6PEY2 450 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 CENPUQ71F23 418 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 ANKRD37Q7Z713 158 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 OR51Q1Q8NH59 317 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 THAP3Q8WTV1 239 aaPredicted RBP19.93■□□□□ 0.78
CD47-202ENST00000361309 GPR137Q96N19 417 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 TSPAN10Q9H1Z9 355 aaPredicted RBP19.93■□□□□ 0.78
CD47-202ENST00000361309 ANKRD10Q9NXR5 420 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 HCN3Q9P1Z3 774 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 ZNF835Q9Y2P0 537 aa19.93■□□□□ 0.78
CD47-202ENST00000361309 CYC1P08574 325 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 CD96P40200 585 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 XCR1P46094 333 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 ALDH6A1Q02252 535 aaKnown RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 CUL1Q13616 776 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 KCTD19Q17RG1 926 aaPredicted RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 KRTCAP3Q53RY4 240 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 KIAA0930Q6ICG6 404 aaPredicted RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 C4orf22Q6V702 233 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 VN1R4Q7Z5H5 301 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 SPPL2CQ8IUH8 684 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 CRLF3Q8IUI8 442 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 CILP2Q8IUL8 1156 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 LRRC56Q8IYG6 542 aaPredicted RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 FBXO15Q8NCQ5 510 aaPredicted RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 GIMAP7Q8NHV1 300 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 MTFMTQ96DP5 389 aaKnown RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 NPAS2Q99743 824 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 MACROD1Q9BQ69 325 aa19.92■□□□□ 0.78
CD47-202ENST00000361309 UTP23Q9BRU9 249 aaKnown RBP19.92■□□□□ 0.78
CD47-202ENST00000361309 TCRBV7S3A2A0A539 114 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 IL1RNP18510 177 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 PTK6Q13882 451 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 OR1C1Q15619 314 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 MEP1AQ16819 746 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 TTLL9Q3SXZ7 439 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 SPINK14Q6IE38 97 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 Q6ZPB1 254 aaPredicted RBP19.91■□□□□ 0.78
CD47-202ENST00000361309 GSTA5Q7RTV2 222 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 RNF10Q8N5U6 811 aaKnown RBP19.91■□□□□ 0.78
CD47-202ENST00000361309 PRELID2Q8N945 189 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 MCOLN3Q8TDD5 553 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 ASB11Q8WXH4 323 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 SCMH1Q96GD3 660 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 TMEM184CQ9NVA4 438 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 MEMO1Q9Y316 297 aa19.91■□□□□ 0.78
CD47-202ENST00000361309 NPIPA5E9PKD4 350 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 SGK494L7N484 410 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 MAN1A2O60476 641 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 CLDN14O95500 239 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 MLYCDO95822 493 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 F7P08709 466 aaPredicted RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 IMPA1P29218 277 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 EEF1DP29692 281 aaKnown RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 BCL6P41182 706 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 KIR3DL1P43629 444 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 AGTR2P50052 363 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 RPS15AP62244 130 aaKnown RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 NEPROQ6NW34 567 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 DRICH1Q6PGQ1 229 aaPredicted RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 NCCRP1Q6ZVX7 275 aaPredicted RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 M1APQ8TC57 530 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 INTS10Q9NVR2 710 aaKnown RBP19.9■□□□□ 0.78
CD47-202ENST00000361309 NPIPA1Q9UND3 350 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 VPS9D1Q9Y2B5 631 aa19.9■□□□□ 0.78
CD47-202ENST00000361309 KCNE1BA0A087WTH5 132 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 ASPDHA6ND91 283 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 GFYI3L273 518 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 AVILO75366 819 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 MPC1LP0DKB6 136 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 CD46P15529 392 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 PAMP19021 973 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 TPSB2P20231 275 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 SSTR2P30874 369 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 SKIV2L2P42285 1042 aaKnown RBP19.89■□□□□ 0.77
CD47-202ENST00000361309 KCNJ1P48048 391 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 TERF1P54274 439 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 CDK16Q00536 496 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 TPSAB1Q15661 275 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 EXT1Q16394 746 aa19.89■□□□□ 0.77
CD47-202ENST00000361309 TMEM214Q6NUQ4 689 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms