RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PSMG2Q969U7 264 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 PYURFQ96I23 114 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 RBP7Q96R05 134 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 DENND2DQ9H6A0 471 aaPredicted RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 GHRLQ9UBU3 117 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 LAMP5Q9UJQ1 280 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 UTS2RQ9UKP6 389 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 SLC45A1Q9Y2W3 748 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 EFCAB9A8MZ26 197 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 TMX2-CTNND1H3BSU7 103 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 CCRL2O00421 344 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 HSPA12AO43301 675 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 DFNA5O60443 496 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 SOX9P48436 509 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 MERTKQ12866 999 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 AIMP2Q13155 320 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 ANKRD46Q86W74 232 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 UBE2J2Q8N2K1 259 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 TMEM209Q96SK2 561 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 PTPN18Q99952 460 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 GMEB2Q9UKD1 530 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 CAPN8A6NHC0 703 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 H6PDO95479 791 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 MARCKSL1P49006 195 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 DCDC5Q6ZRR9 648 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 SUSD3Q96L08 255 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 TIMM22Q9Y584 194 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 C4BPAP04003 597 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 EDNRAP25101 427 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 HADHBP55084 474 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 CHERPQ8IWX8 916 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 DPAGT1Q9H3H5 408 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 CHRAC1Q9NRG0 131 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 ARPC2O15144 300 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 KLK1P06870 262 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 RPS21P63220 83 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 ITPRIPL2Q3MIP1 535 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 SLC36A3Q495N2 470 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 TPRG1LQ5T0D9 272 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 NTAN1Q96AB6 310 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 FBRSQ9HAH7 460 aa9.42□□□□□ -0.9
CUX1-203ENST00000360264 FAM120CQ9NX05 1096 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 TRNAU1APQ9NX07 287 aaKnown RBP9.42□□□□□ -0.9
CUX1-203ENST00000360264 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CDC7O00311 574 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ACP5P13686 325 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 GDPD4Q6W3E5 623 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 LRRTM4Q86VH4 590 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OR8H3Q8N146 312 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 BMFQ96LC9 184 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 RMI1Q9H9A7 625 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 BRF2Q9HAW0 419 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 HCN4Q9Y3Q4 1203 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 PGLSO95336 258 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 VIPR1P32241 457 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 REEP3Q6NUK4 255 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CD99L2Q8TCZ2 262 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 COL21A1Q96P44 957 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 FN3KQ9H479 309 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CSKP41240 450 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 GBE1Q04446 702 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SLC10A7Q0GE19 358 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 TIGD6Q17RP2 521 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 BACE2Q9Y5Z0 518 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ARL5AQ9Y689 179 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 C2CD4BA6NLJ0 364 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SLBPQ14493 270 aaKnown RBP eCLIP9.41□□□□□ -0.9
CUX1-203ENST00000360264 GPR68Q15743 365 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ZNF792Q3KQV3 632 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 VWA5B1Q5TIE3 1220 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 TMEM126BQ8IUX1 230 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CXorf21Q9HAI6 301 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ACSL5Q9ULC5 683 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 NFATC2Q13469 925 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 LRRN1Q6UXK5 716 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OTOP2Q7RTS6 562 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CMTR2Q8IYT2 770 aaKnown RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 FAM84AQ96KN4 292 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CITED4Q96RK1 184 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ASB6Q9NWX5 421 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 TNFRSF10DQ9UBN6 386 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ZNF69Q9UC07 566 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SCML2Q9UQR0 700 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 GJB1P08034 283 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 BNIP1Q12981 228 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 DAZLQ92904 295 aaKnown RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 GTPBP2Q9BX10 602 aaKnown RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 ELAC1Q9H777 363 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms