RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MARCH5Q9NX47 278 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 RAB26Q9ULW5 256 aa14.43□□□□□ -0.1
COL17A1-201ENST00000353479 A0A1W2PP18 115 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 E7ENX8 843 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 BTN3A3O00478 584 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ABLIM1O14639 778 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 RGS10O43665 173 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 XRCC1P18887 633 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 CDKN1CP49918 316 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 SLC7A9P82251 487 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 NFE2L1Q14494 772 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 OR4C6Q8NH72 309 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 C1GALT1C1Q96EU7 318 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 TGM7Q96PF1 710 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PLEKHG4BQ96PX9 1271 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 MVB12BQ9H7P6 319 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ELOA3DA6NLF2 546 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 OR5K4A6NMS3 321 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PDYNP01213 254 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 CCT3P49368 545 aaKnown RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ELOA3BQ3SY89 546 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ARMC3Q5W041 872 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ZBTB46Q86UZ6 589 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF527Q8NB42 609 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ELOA3Q8NG57 546 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 MMABQ96EY8 250 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 TPT1P8Q9HAU6 139 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 IL1RAPQ9NPH3 570 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ARHGEF3Q9NR81 526 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 DDX60LQ5H9U9 1706 aaKnown RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 CPSF4LA6NMK7 179 aaKnown RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 CAPN5O15484 640 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ASGR2P07307 311 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PDCD4Q53EL6 469 aaKnown RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 OR4K1Q8NGD4 311 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF689Q96CS4 500 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 COQ10BQ9H8M1 238 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 NEUROD4Q9HD90 331 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 KLF15Q9UIH9 416 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 FAM221BA6H8Z2 402 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 DRD1P21728 446 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 DIO3P55073 304 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 CDK6Q00534 326 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 UNC50Q53HI1 259 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PNPLA1Q8N8W4 532 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ASB9Q96DX5 294 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 FBRSQ9HAH7 460 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 EBF2Q9HAK2 575 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ADGRE1Q14246 886 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 OR4D1Q15615 310 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PLA2G15Q8NCC3 412 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 SLC25A36Q96CQ1 311 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 TRIB3Q96RU7 358 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 Q9N2J8 555 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 PCDHGA2Q9Y5H1 932 aa14.42□□□□□ -0.1
COL17A1-201ENST00000353479 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF217O75362 1048 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 PRKD3O94806 890 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 ENPP2Q13822 863 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 UBAP2Q5T6F2 1119 aaKnown RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 GPR153Q6NV75 609 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 NUP54Q7Z3B4 507 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 AMIGO1Q86WK6 493 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 OR5M3Q8NGP4 307 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 OR5K1Q8NHB7 308 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 SNX33Q8WV41 574 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 MKKSQ9NPJ1 570 aaPredicted RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 TVP23BQ9NYZ1 205 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 PRSS51A0A1B0GVH4 220 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 LILRB3O75022 631 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 CASRP41180 1078 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 TMED10P49755 219 aaKnown RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 GSK3BP49841 420 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 PKDCCQ504Y2 493 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 TCEAL5Q5H9L2 206 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 C6orf136Q5SQH8 315 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 AQP12BA6NM10 295 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 RFXAPO00287 272 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 CDC123O75794 336 aaPredicted RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 RSL1D1O76021 490 aaKnown RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 JMJD7P0C870 316 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 THEGLP0DJG4 465 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 CD72P21854 359 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 IL4RP24394 825 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 SLC6A11P48066 632 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 ZSWIM7Q19AV6 140 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 KLHL24Q6TFL4 600 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 CYS1Q717R9 158 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 ASPGQ86U10 573 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 ARHGAP12Q8IWW6 846 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 AQP12AQ8IXF9 295 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 OR56A1Q8NGH5 318 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 PKP4Q99569 1192 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 OR51V1Q9H2C8 321 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 MTMR10Q9NXD2 777 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 RSL24D1Q9UHA3 163 aaKnown RBP14.41□□□□□ -0.1
COL17A1-201ENST00000353479 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
COL17A1-201ENST00000353479 CFL2Q9Y281 166 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms