RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 EXOSC8Q96B26 276 aaKnown RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 KCNH6Q9H252 994 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM98Q9Y2Y6 226 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 DGKBQ9Y6T7 804 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 AMIGO2Q86SJ2 522 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 A0A0G2JPF8 293 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 PRSS51A0A1B0GVH4 220 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 HNRNPCL3B7ZW38 293 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 TIPRLO75663 272 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 PGRP06401 933 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 HNRNPCL4P0DMR1 293 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 MAGEA12P43365 314 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 RPL5P46777 297 aaKnown RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF763Q0D2J5 394 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ARHGAP19Q14CB8 494 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM35AQ53FP2 167 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 LIPIQ6XZB0 460 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 C11orf74Q86VG3 221 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 OR10A6Q8NH74 314 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 COX4I2Q96KJ9 171 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 LMLNQ96KR4 655 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 SOX30O94993 753 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ARSAP15289 507 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 RGRP47804 291 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ELOCQ15369 112 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 EIPR1Q53HC9 387 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 FAM78AQ5JUQ0 283 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ATG9BQ674R7 924 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 C2orf73Q8N5S3 287 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 SLC17A9Q9BYT1 436 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 SMPD3Q9NY59 655 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 BAIAP2Q9UQB8 552 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 EEDO75530 441 aaKnown RBP11.77□□□□□ -0.52
SMAD9-201ENST00000350148 PREPP48147 710 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 CSNK2BP67870 215 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 HTRA4P83105 476 aaPredicted RBP11.77□□□□□ -0.52
SMAD9-201ENST00000350148 LGALS3BPQ08380 585 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 NCCRP1Q6ZVX7 275 aaPredicted RBP11.77□□□□□ -0.52
SMAD9-201ENST00000350148 NAT14Q8WUY8 206 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 CRISPLD1Q9H336 500 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 EPHX3Q9H6B9 360 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 ANKHQ9HCJ1 492 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 COQ6Q9Y2Z9 468 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 PARP14Q460N5 1801 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 A0A096LPI6 279 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 MPZL2O60487 215 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 G6PDP11413 515 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 ALOX12P18054 663 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 RABIFP47224 123 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 AGTR2P50052 363 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 OGFOD2Q6N063 350 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 PDPRQ8NCN5 879 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 GPR26Q8NDV2 337 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 CAMK1GQ96NX5 476 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 GSTO2Q9H4Y5 243 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM30AQ9NV96 361 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 GIN1Q9NXP7 522 aa11.77□□□□□ -0.52
SMAD9-201ENST00000350148 TCRBV21S2A2A0A5A6 115 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 CDC40O60508 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 TBX10O75333 385 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 UGT2B17O75795 530 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 CTSOP43234 321 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 MINDY1Q8N5J2 469 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 OR5K1Q8NHB7 308 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 VMP1Q96GC9 406 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 UBXN10Q96LJ8 280 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 CD320Q9NPF0 282 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 TIMMDC1Q9NPL8 285 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 C17orf113A0A1B0GUU1 675 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 IGLON5A6NGN9 336 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 MYL12AP19105 171 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 GDF5P43026 501 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 UFM1P61960 85 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 PUS10Q3MIT2 529 aaKnown RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 GRHL2Q6ISB3 625 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 Q6ZNB5 142 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 ADGRG6Q86SQ4 1221 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 DCP2Q8IU60 420 aaKnown RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 LINC00471Q8N535 108 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 HDAC8Q9BY41 377 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 MS4A12Q9NXJ0 267 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 EMCNQ9ULC0 261 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 CLIC1O00299 241 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 PAICSP22234 425 aaKnown RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 RHDQ02161 417 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms