RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 EIF1BO60739 113 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 RGS11O94810 467 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 SIX3O95343 332 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 HK1P19367 917 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 CXCL3P19876 107 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 EIF1P41567 113 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 POLR2JP52435 117 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 SWI5Q1ZZU3 235 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 USP39Q53GS9 565 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 LRRC66Q68CR7 880 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 NCBP2-AS2Q69YL0 99 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 GHDCQ8N2G8 530 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 PYROXD2Q8N2H3 581 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 DNAJC5GQ8N7S2 189 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 C19orf18Q8NEA5 215 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 LPCAT1Q8NF37 534 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 OR2T12Q8NG77 320 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 OR10A6Q8NH74 314 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 ZNF670Q9BS34 389 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 ELP3Q9H9T3 547 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 EIF2B3Q9NR50 452 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 DNAJC11Q9NVH1 559 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 LYARQ9NX58 379 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 UBP1Q9NZI7 540 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 HCN3Q9P1Z3 774 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 ZFR2Q9UPR6 939 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 PRAMEF33A0A0G2JMD5 474 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 KRBOX1C9JBD0 128 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 H7C2Y5 167 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 M0QYV0 167 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 E2F3O00716 465 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 MFSD11O43934 449 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 PRAMEF10O60809 474 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 TOXO94900 526 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 ACAA1P09110 424 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 FAM157BP0CG42 384 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 LHCGRP22888 699 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 HMGCS2P54868 508 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 VGLL4Q14135 290 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 PAN3Q58A45 887 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 FBXO48Q5FWF7 155 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 CPZQ66K79 652 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 VASNQ6EMK4 673 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 EIF3MQ7L2H7 374 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 ATCAYQ86WG3 371 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 RNF34Q969K3 372 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 MRPL48Q96GC5 212 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 COQ10AQ96MF6 247 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 NSUN5Q96P11 429 aaKnown RBP10.32□□□□□ -0.76
CAPN3-203ENST00000349748 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 MED28Q9H204 178 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 TRPM5Q9NZQ8 1165 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 KIF17Q9P2E2 1029 aa10.32□□□□□ -0.76
CAPN3-203ENST00000349748 A0A087WZ62 844 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 M0R129 80 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 TO15178 435 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 LYRM1O43325 122 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 PROM1O43490 865 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 SLC22A3O75751 556 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 LPLP06858 475 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 ADRA2AP08913 450 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 ZNF806P0C7X5 589 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 MYCLP12524 364 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 GOT1P17174 413 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 PTAFRP25105 342 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 PREPP48147 710 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 AGFG1P52594 562 aaKnown RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 VSX2P58304 361 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 LRRC32Q14392 662 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 SSX1Q16384 188 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 KIAA1614Q5VZ46 1190 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 TRIQKQ629K1 86 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 GPR153Q6NV75 609 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 DLEU7Q6UYE1 221 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 STX19Q8N4C7 294 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 LRRC17Q8N6Y2 441 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 EFHBQ8N7U6 833 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 GPR152Q8TDT2 470 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 ELP4Q96EB1 424 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 CSPG4P5Q96PW8 444 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 TMEM175Q9BSA9 504 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 MARVELD1Q9BSK0 173 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 CCM2Q9BSQ5 444 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 IKZF5Q9H5V7 419 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 RERGLQ9H628 205 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 ALG9Q9H6U8 611 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 ZNF275Q9NSD4 429 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 OLA1Q9NTK5 396 aaKnown RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 KLK4Q9Y5K2 254 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 GNB5O14775 395 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 APOL3O95236 402 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 CYP17A1P05093 508 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 CNPP09543 421 aaKnown RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 SLC2A2P11168 524 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-203ENST00000349748 PTPRAP18433 802 aa10.31□□□□□ -0.76
CAPN3-203ENST00000349748 SDHBP21912 280 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms