RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TMCC2O75069 709 aa17.24■□□□□ 0.35
APP-202ENST00000348990 HOXB6P17509 224 aaKnown RBP17.24■□□□□ 0.35
APP-202ENST00000348990 SLC6A4P31645 630 aa17.24■□□□□ 0.35
APP-202ENST00000348990 GANABQ14697 944 aaKnown RBP17.24■□□□□ 0.35
APP-202ENST00000348990 CCL14Q16627 93 aa17.24■□□□□ 0.35
APP-202ENST00000348990 LRIF1Q5T3J3 769 aa17.24■□□□□ 0.35
APP-202ENST00000348990 TRIM46Q7Z4K8 759 aa17.24■□□□□ 0.35
APP-202ENST00000348990 RBFAQ8N0V3 343 aa17.24■□□□□ 0.35
APP-202ENST00000348990 SLC34A3Q8N130 599 aa17.24■□□□□ 0.35
APP-202ENST00000348990 DEPDC4Q8N2C3 294 aa17.24■□□□□ 0.35
APP-202ENST00000348990 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.24■□□□□ 0.35
APP-202ENST00000348990 OR9Q2Q8NGE9 314 aa17.24■□□□□ 0.35
APP-202ENST00000348990 FATE1Q969F0 183 aa17.24■□□□□ 0.35
APP-202ENST00000348990 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
APP-202ENST00000348990 SNX18Q96RF0 628 aa17.24■□□□□ 0.35
APP-202ENST00000348990 FCF1Q9Y324 198 aaKnown RBP17.24■□□□□ 0.35
APP-202ENST00000348990 RALGAPA2Q2PPJ7 1873 aa17.23■□□□□ 0.35
APP-202ENST00000348990 M0QZQ0 153 aa17.23■□□□□ 0.35
APP-202ENST00000348990 PRKCAP17252 672 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SLC11A2P49281 568 aa17.23■□□□□ 0.35
APP-202ENST00000348990 GNG2P59768 71 aa17.23■□□□□ 0.35
APP-202ENST00000348990 UBE3AQ05086 875 aa17.23■□□□□ 0.35
APP-202ENST00000348990 PPIGQ13427 754 aaKnown RBP eCLIP17.23■□□□□ 0.35
APP-202ENST00000348990 CCDC85BQ15834 202 aaPredicted RBP17.23■□□□□ 0.35
APP-202ENST00000348990 FBXO43Q4G163 708 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ZNF467Q7Z7K2 595 aaPredicted RBP17.23■□□□□ 0.35
APP-202ENST00000348990 ZNF280BQ86YH2 543 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ADGRG2Q8IZP9 1017 aa17.23■□□□□ 0.35
APP-202ENST00000348990 DNAJB8Q8NHS0 232 aa17.23■□□□□ 0.35
APP-202ENST00000348990 VPS35Q96QK1 796 aa17.23■□□□□ 0.35
APP-202ENST00000348990 TMEM184CQ9NVA4 438 aa17.23■□□□□ 0.35
APP-202ENST00000348990 DNMT3AQ9Y6K1 912 aaPredicted RBP17.23■□□□□ 0.35
APP-202ENST00000348990 OR6C70A6NIJ9 312 aa17.23■□□□□ 0.35
APP-202ENST00000348990 IFI30P13284 250 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ITGA1P56199 1179 aa17.23■□□□□ 0.35
APP-202ENST00000348990 PDZK1Q5T2W1 519 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ARMC12Q5T9G4 340 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SLC44A2Q8IWA5 706 aaPredicted RBP17.23■□□□□ 0.35
APP-202ENST00000348990 SUN5Q8TC36 379 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SMURF1Q9HCE7 757 aa17.23■□□□□ 0.35
APP-202ENST00000348990 CCDC59Q9P031 241 aaKnown RBP17.23■□□□□ 0.35
APP-202ENST00000348990 RHCGQ9UBD6 479 aa17.23■□□□□ 0.35
APP-202ENST00000348990 TEKT2Q9UIF3 430 aa17.23■□□□□ 0.35
APP-202ENST00000348990 PLK4O00444 970 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SOX3P41225 446 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SLX4IPQ5VYV7 408 aa17.23■□□□□ 0.35
APP-202ENST00000348990 NOXRED1Q6NXP6 359 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ERICH5Q6P6B1 374 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SYCE2Q6PIF2 218 aa17.23■□□□□ 0.35
APP-202ENST00000348990 NIPSNAP1Q9BPW8 284 aa17.23■□□□□ 0.35
APP-202ENST00000348990 TCF25Q9BQ70 676 aa17.23■□□□□ 0.35
APP-202ENST00000348990 PDFQ9HBH1 243 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ABCB9Q9NP78 766 aa17.23■□□□□ 0.35
APP-202ENST00000348990 ABCB8Q9NUT2 735 aa17.23■□□□□ 0.35
APP-202ENST00000348990 TRPS1Q9UHF7 1281 aa17.23■□□□□ 0.35
APP-202ENST00000348990 SLC6A14Q9UN76 642 aa17.23■□□□□ 0.35
APP-202ENST00000348990 MRPS14O60783 128 aaKnown RBP17.22■□□□□ 0.35
APP-202ENST00000348990 TSC22D2O75157 780 aa17.22■□□□□ 0.35
APP-202ENST00000348990 SNX4O95219 450 aa17.22■□□□□ 0.35
APP-202ENST00000348990 PRIM2P49643 509 aa17.22■□□□□ 0.35
APP-202ENST00000348990 BOP1Q14137 746 aaKnown RBP17.22■□□□□ 0.35
APP-202ENST00000348990 E2F2Q14209 437 aa17.22■□□□□ 0.35
APP-202ENST00000348990 SMUG1Q53HV7 270 aa17.22■□□□□ 0.35
APP-202ENST00000348990 CBLL1Q75N03 491 aa17.22■□□□□ 0.35
APP-202ENST00000348990 GPR156Q8NFN8 814 aa17.22■□□□□ 0.35
APP-202ENST00000348990 TMEM203Q969S6 136 aa17.22■□□□□ 0.35
APP-202ENST00000348990 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
APP-202ENST00000348990 SLC22A14Q9Y267 594 aa17.22■□□□□ 0.35
APP-202ENST00000348990 A0A1W2PQ09 198 aa17.22■□□□□ 0.35
APP-202ENST00000348990 GKP32189 559 aa17.22■□□□□ 0.35
APP-202ENST00000348990 CDC42P60953 191 aa17.22■□□□□ 0.35
APP-202ENST00000348990 TTLL9Q3SXZ7 439 aa17.22■□□□□ 0.35
APP-202ENST00000348990 LRRC66Q68CR7 880 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
APP-202ENST00000348990 CD300LGQ6UXG3 332 aa17.22■□□□□ 0.35
APP-202ENST00000348990 SERPINA11Q86U17 422 aa17.22■□□□□ 0.35
APP-202ENST00000348990 LAX1Q8IWV1 398 aa17.22■□□□□ 0.35
APP-202ENST00000348990 FAM9CQ8IZT9 166 aa17.22■□□□□ 0.35
APP-202ENST00000348990 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
APP-202ENST00000348990 C8orf48Q96LL4 319 aa17.22■□□□□ 0.35
APP-202ENST00000348990 GKN1Q9NS71 199 aa17.22■□□□□ 0.35
APP-202ENST00000348990 FAM25AB3EWG3 89 aa17.22■□□□□ 0.35
APP-202ENST00000348990 FAM25CB3EWG5 89 aa17.22■□□□□ 0.35
APP-202ENST00000348990 FAM25GB3EWG6 89 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ARHGEF9O43307 516 aa17.22■□□□□ 0.35
APP-202ENST00000348990 AOC2O75106 756 aa17.22■□□□□ 0.35
APP-202ENST00000348990 TRBC1P01850 177 aa17.22■□□□□ 0.35
APP-202ENST00000348990 LAMP1P11279 417 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ACSM2AQ08AH3 577 aa17.22■□□□□ 0.35
APP-202ENST00000348990 LRRC74AQ0VAA2 488 aa17.22■□□□□ 0.35
APP-202ENST00000348990 EXOC3L2Q2M3D2 409 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ACSM2BQ68CK6 577 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ERAP2Q6P179 960 aa17.22■□□□□ 0.35
APP-202ENST00000348990 UBE2R2Q712K3 238 aaPredicted RBP17.22■□□□□ 0.35
APP-202ENST00000348990 CARNMT1Q8N4J0 409 aa17.22■□□□□ 0.35
APP-202ENST00000348990 TRIM63Q969Q1 353 aa17.22■□□□□ 0.35
APP-202ENST00000348990 IL17CQ9P0M4 197 aa17.22■□□□□ 0.35
APP-202ENST00000348990 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
APP-202ENST00000348990 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
APP-202ENST00000348990 ARHGAP33O14559 1287 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms