RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 FBXO43Q4G163 708 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 CACHD1Q5VU97 1274 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 SUSD1Q6UWL2 747 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 PAMR1Q6UXH9 720 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 DPY19L3Q6ZPD9 716 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 NLRP8Q86W28 1048 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ZFAND1Q8TCF1 268 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ASB15Q8WXK1 588 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 COQ8BQ96D53 544 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 RNF31Q96EP0 1072 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 PPP3R2Q96LZ3 170 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ZNF451Q9Y4E5 1061 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 KLK4Q9Y5K2 254 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 GREB1Q4ZG55 1949 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 IQCF5A8MTL0 148 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 NDUFS3O75489 264 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 CCNDBP1O95273 360 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TARDBPQ13148 414 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 SGO1Q5FBB7 561 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 SDE2Q6IQ49 451 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 GLT6D1Q7Z4J2 308 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 LAX1Q8IWV1 398 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 DEDD2Q8WXF8 326 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 COL21A1Q96P44 957 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 OR5M11Q96RB7 305 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 UCK2Q9BZX2 261 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 CLMPQ9H6B4 373 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 REEP1Q9H902 201 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 SARS2Q9NP81 518 aaKnown RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 ASAH2Q9NR71 780 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TLR8Q9NR97 1041 aaKnown RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TMEM39AQ9NV64 488 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 NLE1Q9NVX2 485 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 VPS4AQ9UN37 437 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 EFCAB10A6NFE3 127 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TSPAN3O60637 253 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 CDKN2CP42773 168 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 IDH2P48735 452 aaKnown RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 YBEYP58557 167 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 DUSP4Q13115 394 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 MED22Q15528 200 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TSTQ16762 297 aaKnown RBP18.04■□□□□ 0.48
SCARF1-202ENST00000348987 PTCHD3Q3KNS1 767 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 FAHD1Q6P587 224 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 YIPF7Q8N8F6 280 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 OR4M1Q8NGD0 313 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 OMA1Q96E52 524 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 IPPKQ9H8X2 491 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 TEKT2Q9UIF3 430 aa18.04■□□□□ 0.48
SCARF1-202ENST00000348987 VWA8A3KMH1 1905 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 CA12O43570 354 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 AOC2O75106 756 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 CD72P21854 359 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 MYL9P24844 172 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 NUDT1P36639 197 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 NKX3-2P78367 333 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 CCSAPQ6IQ19 270 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 IDO2Q6ZQW0 420 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 ZSWIM9Q86XI8 627 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 PEX13Q92968 403 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 PLCXD1Q9NUJ7 323 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 ZFP37Q9Y6Q3 630 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 A0A075B6Q4 140 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 NOS1APO75052 506 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 HOXB6P17509 224 aaKnown RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 SGSHP51688 502 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 GTF2H2Q13888 395 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 INO80DQ53TQ3 878 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 TJAP1Q5JTD0 557 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 C10orf62Q5T681 223 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 GTF2H2CQ6P1K8 395 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 DOK6Q6PKX4 331 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 TMPRSS11AQ6ZMR5 421 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 MGME1Q9BQP7 344 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 CNPPD1Q9BV87 410 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 BARHL1Q9BZE3 327 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 SERHLQ9NQF3 203 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 OLA1Q9NTK5 396 aaKnown RBP18.03■□□□□ 0.48
SCARF1-202ENST00000348987 FKBP14Q9NWM8 211 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 FKBPLQ9UIM3 349 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 TMPRSS11EQ9UL52 423 aa18.03■□□□□ 0.48
SCARF1-202ENST00000348987 H3BM21 787 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 M0R129 80 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 ERP29P30040 261 aaKnown RBP18.02■□□□□ 0.48
SCARF1-202ENST00000348987 RPS19P39019 145 aaKnown RBP18.02■□□□□ 0.48
SCARF1-202ENST00000348987 TGM4P49221 684 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 IL2P60568 153 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 SLC24A5Q71RS6 500 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 ADAMTSL2Q86TH1 951 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 EFHBQ8N7U6 833 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 LPCAT1Q8NF37 534 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 AASDHPPTQ9NRN7 309 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 TRMT6Q9UJA5 497 aaKnown RBP18.02■□□□□ 0.48
SCARF1-202ENST00000348987 SNX7Q9UNH6 387 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 AP3M1Q9Y2T2 418 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 MTMR11A4FU01 709 aa18.02■□□□□ 0.48
SCARF1-202ENST00000348987 B4DXG7 233 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms