RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PITHD1Q9GZP4 211 aaPredicted RBP16.66■□□□□ 0.26
CLDN4-201ENST00000340958 TMEM184CQ9NVA4 438 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 NDE1Q9NXR1 346 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 RAB23Q9ULC3 237 aa16.66■□□□□ 0.26
CLDN4-201ENST00000340958 CFAP54Q96N23 3096 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 CCDC154A6NI56 674 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SAP18O00422 153 aaKnown RBP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 GSC2O15499 205 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SERPIND1P05546 499 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 BCKDHAP12694 445 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 PEBP1P30086 187 aaKnown RBP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 PIK3CBP42338 1070 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 ARRB1P49407 418 aaPredicted RBP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 MAZP56270 477 aaKnown RBP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 CSNK1G2P78368 415 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 REEP5Q00765 189 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 PTGR1Q14914 329 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 PLK5Q496M5 336 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 VPS26BQ4G0F5 336 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 TMEM26Q6ZUK4 368 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 ZNF761Q86XN6 746 aaPredicted RBP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLDN4-201ENST00000340958 ADGRF3Q8IZF5 1079 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SDR16C5Q8N3Y7 309 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 CDC26Q8NHZ8 85 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SERPINI1Q99574 410 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 THTPAQ9BU02 230 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 HRASLS2Q9NWW9 162 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 BAIAP2L1Q9UHR4 511 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SNX7Q9UNH6 387 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 SNX11Q9Y5W9 270 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 GVINP1Q7Z2Y8 2422 aa16.65■□□□□ 0.26
CLDN4-201ENST00000340958 LAMA1P25391 3075 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 FAM234BA2RU67 622 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 C2orf74A8MZ97 194 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 ZW10O43264 779 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 NRP2O60462 931 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 PTX3P26022 381 aaPredicted RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 SERPINB1P30740 379 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 KIAA0040Q15053 153 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 REP15Q6BDI9 236 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 NOXRED1Q6NXP6 359 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 PLD3Q8IV08 490 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 FUNDC1Q8IVP5 155 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 DEFB107AQ8IZN7 70 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 PCYOX1LQ8NBM8 494 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 OR4K1Q8NGD4 311 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 CLHC1Q8NHS4 586 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 SPDL1Q96EA4 605 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 ZC3H10Q96K80 434 aaKnown RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 CENPKQ9BS16 269 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 CADM1Q9BY67 442 aaKnown RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 OR51B5Q9H339 312 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 ACTR10Q9NZ32 417 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 RUVBL1Q9Y265 456 aaKnown RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 TDRD6O60522 2096 aaKnown RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 TNRC6BQ9UPQ9 1833 aaKnown RBP16.64■□□□□ 0.25
CLDN4-201ENST00000340958 PCM1Q15154 2024 aa16.64■□□□□ 0.25
CLDN4-201ENST00000340958 FAM221BA6H8Z2 402 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 BBIP1A8MTZ0 92 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 LMO7DNF2Z398 122 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 MRASO14807 208 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 CFLARO15519 480 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 PRICKLE3O43900 615 aaPredicted RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 PIAS2O75928 621 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ETHE1O95571 254 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 MRPL19P49406 292 aaKnown RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 KIAA1614Q5VZ46 1190 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 BLOC1S3Q6QNY0 202 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 OOSP2Q86WS3 158 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 SYT12Q8IV01 421 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ARL14Q8N4G2 192 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 C1orf52Q8N6N3 182 aaKnown RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 TTLQ8NG68 377 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 PROKR1Q8TCW9 393 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 SLC45A3Q96JT2 553 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 TEX37Q96LM6 180 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 TSSK3Q96PN8 268 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 SLC38A3Q99624 504 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 NT5DC2Q9H857 520 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 SLC6A20Q9NP91 592 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 TMEM74BQ9NUR3 256 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ASIC5Q9NY37 505 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 AHSPQ9NZD4 102 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 KLHL20Q9Y2M5 609 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ENTPD2Q9Y5L3 495 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 IGKV1-8A0A0C4DH67 115 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ITGAXP20702 1163 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 RAP1GDS1P52306 607 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 LAIR1Q6GTX8 287 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 DSELQ8IZU8 1212 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 METTL2AQ96IZ6 378 aaKnown RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.63■□□□□ 0.25
CLDN4-201ENST00000340958 RHBGQ9H310 441 aa16.63■□□□□ 0.25
CLDN4-201ENST00000340958 ERVMER34-1Q9H9K5 563 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms