RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RCN3Q96D15 328 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 GPR22Q99680 433 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 LHX3Q9UBR4 397 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 SPO11Q9Y5K1 396 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 FAM234BA2RU67 622 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 CDC14CA4D256 554 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 A8MT66 165 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 ZBTB11O95625 1053 aaPredicted RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 PTSQ03393 145 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 CDC73Q6P1J9 531 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 DUS1LQ6P1R4 473 aaKnown RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 ZNF605Q86T29 641 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 ZNF786Q8N393 782 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 SMYD1Q8NB12 490 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 GLIS1Q8NBF1 620 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 C12orf65Q9H3J6 166 aaKnown RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 B3GAT2Q9NPZ5 323 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 NRP2O60462 931 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 CDKN1CP49918 316 aaPredicted RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 TCEAL1Q15170 157 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 Q6ZS52 159 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 ELL3Q9HB65 397 aaPredicted RBP12.39□□□□□ -0.43
LIN54-201ENST00000340417 SH3GLB1Q9Y371 365 aa12.39□□□□□ -0.43
LIN54-201ENST00000340417 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 A8MVJ9 347 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 ARHGEF33A8MVX0 844 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 IL1RNP18510 177 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 FAM174BQ3ZCQ3 159 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 CCDC28BQ9BUN5 200 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HPF1Q9NWY4 346 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 TAS2R9Q9NYW1 312 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MYOCOSA0A1B0GUC4 107 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 PRORSD1PA6NEY8 169 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HSMCR30P0CW71 290 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HNRNPH1P31943 449 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 PDX1P52945 283 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 CDC42P60953 191 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 GLB1L3Q8NCI6 653 aaPredicted RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 CNBD2Q96M20 576 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 BTBD10Q9BSF8 475 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 TMEM198Q66K66 360 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 TWSG1Q9GZX9 223 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 SAMHD1Q9Y3Z3 626 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 UBOX5O94941 541 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 PRG2P13727 222 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 SLC26A3P40879 764 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 ADPRHP54922 357 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 SLAMF1Q13291 335 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HTR4Q13639 388 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MICU2Q8IYU8 434 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MYLK2Q9H1R3 596 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 POT1Q9NUX5 634 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 GRHL1Q9NZI5 618 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 AP1M2Q9Y6Q5 423 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 MYH10P35580 1976 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 XKP51811 444 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 HK3P52790 923 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 BNIP2Q12982 314 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 LIPJQ5W064 366 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 OR52E1Q8NGJ3 308 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 IER2Q9BTL4 223 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 ZNF358Q9NW07 568 aa12.38□□□□□ -0.43
LIN54-201ENST00000340417 THUMPD1Q9NXG2 353 aaKnown RBP12.38□□□□□ -0.43
LIN54-201ENST00000340417 GP1BBP13224 206 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
LIN54-201ENST00000340417 ACTR3P61158 418 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 RCN1Q15293 331 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 NXPE4Q6UWF7 544 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 OR56A1Q8NGH5 318 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 TMCO6Q96DC7 493 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 C9JVG2 144 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SERPINA6P08185 405 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 RRADP55042 308 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 KDM1BQ8NB78 822 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SLCO2A1Q92959 643 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 NPAS2Q99743 824 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 MOCS1Q9NZB8 636 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms