RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NPPBP16860 134 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 CCNYL2Q5T2Q4 361 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 TMIGD1Q6UXZ0 262 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 MICU2Q8IYU8 434 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 SMYD1Q8NB12 490 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 OR4E2Q8NGC2 313 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 HM13Q8TCT9 377 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 CENPNQ96H22 339 aaPredicted RBP9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 YIPF4Q9BSR8 244 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 ADI1Q9BV57 179 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 RHBGQ9H310 441 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 RIBC2Q9H4K1 309 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 DDX18Q9NVP1 670 aaKnown RBP9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 KIF17Q9P2E2 1029 aa9.8□□□□□ -0.84
RBFOX1-202ENST00000340209 MTCL1Q9Y4B5 1905 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 POM121BA6NF01 834 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 AQP12BA6NM10 295 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 B4GAT1O43505 415 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 IL3P08700 152 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PRPS2P11908 318 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 HOXB3P14651 431 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZNF26P17031 533 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 HPCAL1P37235 193 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 OR1E2P47887 323 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 CLDN8P56748 225 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TAS2R38P59533 333 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RAB8AP61006 207 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 MYBPC1Q00872 1141 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TP53BP2Q13625 1128 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 SIM2Q14190 667 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 CYP2A13Q16696 494 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 AGBL4Q5VU57 503 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZNF776Q68DI1 518 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZNF852Q6ZMS4 543 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TRIM46Q7Z4K8 759 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TICAM1Q8IUC6 712 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 AQP12AQ8IXF9 295 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 VPS37AQ8NEZ2 397 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 CCL4L1Q8NHW4 92 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 UBTD2Q8WUN7 234 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RLN3Q8WXF3 142 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PPCDCQ96CD2 204 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RMND5BQ96G75 393 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 FCRL4Q96PJ5 515 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 NR1H4Q96RI1 486 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 BDH2Q9BUT1 245 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 C9orf16Q9BUW7 83 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ABCG4Q9H172 646 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 SUFUQ9UMX1 484 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RUVBL1Q9Y265 456 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 SEC16AO15027 2179 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 KIF1CO43896 1103 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 CREG1O75629 220 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 C8orf89P0DMQ9 161 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ACPPP15309 386 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ACTR1BP42025 376 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ACTR1AP61163 376 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PAGE2BQ5JRK9 111 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RBM44Q6ZP01 1051 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 OLIG3Q7RTU3 272 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 HORMAD1Q86X24 394 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZDHHC13Q8IUH4 622 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 DHRSXQ8N5I4 330 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RPLP0P6Q8NHW5 317 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 C17orf62Q9BQA9 187 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZDHHC5Q9C0B5 715 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 SLC52A3Q9NQ40 469 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PDP2Q9P2J9 529 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 FAF1Q9UNN5 650 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 GABRR3A8MPY1 467 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 PTGES3LE9PB15 166 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 CASQ2O14958 399 aaPredicted RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 GPC1P35052 558 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 RPS9P46781 194 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 BIRC2Q13490 618 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 NKG7Q16617 165 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 UBE2Q1Q7Z7E8 422 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TRIM73Q86UV7 250 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 LIN28AQ9H9Z2 209 aaKnown RBP9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 TPT1P8Q9HAU6 139 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 FZD4Q9ULV1 537 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 GBF1Q92538 1859 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 ZDBF2Q9HCK1 2354 aa9.79□□□□□ -0.84
RBFOX1-202ENST00000340209 VPS13AQ96RL7 3174 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 YY2O15391 372 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 C1GALT1C1LP0DN25 315 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 ETFAP13804 333 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 COL9A1P20849 921 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 ACSL1P33121 698 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 MAPK9P45984 424 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 PIGFQ07326 219 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 FGL2Q14314 439 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 KIAA0040Q15053 153 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TMEM196Q5HYL7 178 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 SLCO4C1Q6ZQN7 724 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 GLB1L3Q8NCI6 653 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 ZCCHC10Q8TBK6 192 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms