RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TAS2R13Q9NYV9 303 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 PLA2G3Q9NZ20 509 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 C19orf25Q9UFG5 118 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-202ENST00000337571 HEATR5BQ9P2D3 2071 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 LOC102723996A0A087X1L8 192 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 A8MUI8 341 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 FOXS1O43638 330 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 JRKO75564 520 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 TTC4O95801 387 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CRYABP02511 175 aaKnown RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 PGAM1P18669 254 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 IMPA1P29218 277 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CCZ1BP86790 482 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CCZ1P86791 482 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 MPP1Q00013 466 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 MAT1AQ00266 395 aaKnown RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 INAQ16352 499 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CYP1B1Q16678 543 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 SYT16Q17RD7 645 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 PIWIL4Q7Z3Z4 852 aaKnown RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 C17orf64Q86WR6 236 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 TBC1D19Q8N5T2 526 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 AMER3Q8N944 861 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 OR9A4Q8NGU2 314 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 OR51Q1Q8NH59 317 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 GIMAP7Q8NHV1 300 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CD200R1Q8TD46 325 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 EEF1AKMT1Q8WVE0 214 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 PSMF1Q92530 271 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 THAP11Q96EK4 314 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 SIGLEC10Q96LC7 697 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 CYTH2Q99418 400 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 MESP1Q9BRJ9 268 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 NAT9Q9BTE0 207 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 AARSD1Q9BTE6 412 aaKnown RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 PARVBQ9HBI1 364 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 ANKHQ9HCJ1 492 aa10.1□□□□□ -0.79
CAPN3-202ENST00000337571 PPANQ9NQ55 473 aaKnown RBP10.1□□□□□ -0.79
CAPN3-202ENST00000337571 NBPF19A0A087WUL8 3843 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 A0A1W2PQ72 361 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 SLC16A5O15375 505 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 P2RX6O15547 441 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 RASAL1O95294 804 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 NSA2O95478 260 aaKnown RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 F10P00742 488 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 STATHP02808 62 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 CYC1P08574 325 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 F7P08709 466 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 SLC35G6P0C7Q6 338 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 DCTP40126 519 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 MAGEA3P43357 314 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 FNTAP49354 379 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 IL2P60568 153 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 TBPL1P62380 186 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF33BQ06732 778 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ACTN3Q08043 901 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 CAPN13Q6MZZ7 669 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 AGTRAPQ6RW13 159 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 TMEM205Q6UW68 189 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 TMEM207Q6UWW9 146 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 CPEB2Q7Z5Q1 589 aaKnown RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 LURAP1LQ8IV03 231 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ZC3H7AQ8IWR0 971 aaKnown RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 LRRC56Q8IYG6 542 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 SLC34A3Q8N130 599 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 NAT8LQ8N9F0 302 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 DNAJB8Q8NHS0 232 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ACTRT1Q8TDG2 376 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 SLC13A3Q8WWT9 602 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF354BQ96LW1 612 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 NDNQ99608 321 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 HAUS8Q9BT25 410 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ATG10Q9H0Y0 220 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 RUBCNLQ9H714 662 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 ASIC3Q9UHC3 531 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 MED16Q9Y2X0 877 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 NEU2Q9Y3R4 380 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 CENPEQ02224 2701 aa10.09□□□□□ -0.79
CAPN3-202ENST00000337571 SPTBN1Q01082 2364 aaKnown RBP10.09□□□□□ -0.79
CAPN3-202ENST00000337571 OR5H15A6NDH6 313 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SGK494L7N484 410 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ZSCAN12O43309 604 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 PRAMEF2O60811 474 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SEC24DO94855 1032 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-202ENST00000337571 WDPCPO95876 746 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ITGAMP11215 1152 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 DEKP35659 375 aaKnown RBP10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SOX11P35716 441 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 BCL6P41182 706 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 XCR1P46094 333 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 AGTR2P50052 363 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 CCR8P51685 355 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SKP1P63208 163 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 CSNK1G2P78368 415 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SP140Q13342 867 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 NAE1Q13564 534 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 CRYMQ14894 314 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 PCOLCEQ15113 449 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 BTBD16Q32M84 506 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms