RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TRAF6Q9Y4K3 522 aa9.39□□□□□ -0.91
SYN3-201ENST00000332840 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
SYN3-201ENST00000332840 FLNCQ14315 2725 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 SLC5A10A0PJK1 596 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 OR6C74A6NCV1 312 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 LRRC14BA6NHZ5 514 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 AGRPO00253 132 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 FCHO1O14526 889 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ANXA5P08758 320 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 HIST1H2AGP0C0S8 130 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 HIST1H2ADP20671 130 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 CYP2A7P20853 494 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 PREPP48147 710 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 CDH13P55290 713 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 HSD11B2P80365 405 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 FOXM1Q08050 763 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 LCP2Q13094 533 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 TUBB3Q13509 450 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
SYN3-201ENST00000332840 METTL21CQ5VZV1 264 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 DUS1LQ6P1R4 473 aaKnown RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 FAM92BQ6ZTR7 304 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ACAD11Q709F0 780 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 UBE2R2Q712K3 238 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 MAVSQ7Z434 540 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 CLNKQ7Z7G1 428 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 PPP1R3BQ86XI6 285 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 SLC22A15Q8IZD6 547 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 NLGN4XQ8N0W4 816 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 TCAIMQ8N3R3 496 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ESX1Q8N693 406 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 LILRA3Q8N6C8 439 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 NLGN4YQ8NFZ3 816 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 AGR3Q8TD06 166 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 MCOLN3Q8TDD5 553 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 TRPC4APQ8TEL6 797 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ZNF483Q8TF39 744 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 SKA2Q8WVK7 121 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 ASB11Q8WXH4 323 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 HIST1H2AHQ96KK5 128 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 FOPNLQ96NB1 174 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 HIST1H2AJQ99878 128 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 EGFL8Q99944 293 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 H2AFJQ9BTM1 129 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 HGH1Q9BTY7 390 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 RAB11FIP5Q9BXF6 653 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 SLC12A9Q9BXP2 914 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 FANCEQ9HB96 536 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 PARVBQ9HBI1 364 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 C1GALT1Q9NS00 363 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 UTP6Q9NYH9 597 aaKnown RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 WWOXQ9NZC7 414 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 OR6C2Q9NZP2 312 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 PCTPQ9UKL6 214 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 ADAMTS6Q9UKP5 1117 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 POMT2Q9UKY4 750 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 CDYLQ9Y232 598 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 STK38LQ9Y2H1 464 aa9.38□□□□□ -0.91
SYN3-201ENST00000332840 RRP15Q9Y3B9 282 aaKnown RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 TMEM184BQ9Y519 407 aaPredicted RBP9.38□□□□□ -0.91
SYN3-201ENST00000332840 GSAPA4D1B5 854 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 GFYI3L273 518 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 J3QKU1 62 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 UBFD1O14562 309 aaKnown RBP9.37□□□□□ -0.91
SYN3-201ENST00000332840 AZIN1O14977 448 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 RAD1O60671 282 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 HNRNPCL1O60812 293 aaKnown RBP9.37□□□□□ -0.91
SYN3-201ENST00000332840 STK17BO94768 372 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 GUCA1CO95843 209 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 ITGB2P05107 769 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 FGF5P12034 268 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 TSPAN8P19075 237 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 CDH3P22223 829 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 ACADLP28330 430 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 PDHA2P29803 388 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 SCTRP47872 440 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 SEPHS1P49903 392 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 AGTR2P50052 363 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 PKNOX1P55347 436 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 AP1S2P56377 157 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 ABHD18Q0P651 414 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 CDC16Q13042 620 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 KRT72Q14CN4 511 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 TBCCQ15814 346 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 PHKG1Q16816 387 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 SLC9B1Q4ZJI4 515 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 ARHGAP40Q5TG30 622 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 PCSK4Q6UW60 755 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 UNC5DQ6UXZ4 953 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 RPS27LQ71UM5 84 aaKnown RBP9.37□□□□□ -0.91
SYN3-201ENST00000332840 AMIGO1Q86WK6 493 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 RASGRP3Q8IV61 690 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 VRK3Q8IV63 474 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 RAB42Q8N4Z0 105 aa9.37□□□□□ -0.91
SYN3-201ENST00000332840 PHC3Q8NDX5 983 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms