RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SPATA13Q96N96 652 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 PNPLA3Q9NST1 481 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 INTS7Q9NVH2 962 aaKnown RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 ZC3H7BQ9UGR2 993 aaKnown RBP13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 POLG2Q9UHN1 485 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 ASF1AQ9Y294 204 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 PKP3Q9Y446 797 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 FAM215AQ9Y5M1 114 aa13.89□□□□□ -0.19
CTHRC1-201ENST00000330295 LOC285095A0A1B0GVY8 99 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CLCA1A8K7I4 914 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 NPIPA2E9PIF3 369 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 NPIPA3F8WFD2 350 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CLDN4O14493 209 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 PSMD3O43242 534 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ZSCAN12O43309 604 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 KCNAB3O43448 404 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 GOSR1O95249 250 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 STIP1P31948 543 aaKnown RBP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ADH7P40394 386 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CCZ1BP86790 482 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CCZ1P86791 482 aaPredicted RBP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ZNF468Q5VIY5 522 aaPredicted RBP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 AADACL2Q6P093 401 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 GLT6D1Q7Z4J2 308 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 TBC1D21Q8IYX1 336 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC5A8Q8N695 610 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 OR5M9Q8NGP3 310 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 C16orf52Q8NHV5 167 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 C10orf90Q96M02 699 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 PIP5K1AQ99755 562 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 MKKSQ9NPJ1 570 aaPredicted RBP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 CDC14AQ9UNH5 594 aa13.88□□□□□ -0.19
CTHRC1-201ENST00000330295 A0A1W2PPR1 153 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FIGNL2A6NMB9 653 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 CTSVO60911 334 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 EMP3P54852 163 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC1A5Q15758 541 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 PARP6Q2NL67 630 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 P3H1Q32P28 736 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 KRTAP24-1Q3LI83 254 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 SIRPB2Q5JXA9 342 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 RTL6Q6ICC9 239 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FRMPD2BQ6IN97 320 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 LANCL3Q6ZV70 420 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 CPEB2Q7Z5Q1 589 aaKnown RBP13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC25A41Q8N5S1 370 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 AMER3Q8N944 861 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FAM71DQ8N9W8 422 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 OR52N2Q8NGI0 321 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 OR5K2Q8NHB8 316 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 METTL21AQ8WXB1 218 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 SLCO2A1Q92959 643 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 RNASE6Q93091 150 aaKnown RBP13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 SH3GL2Q99962 352 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FAM118BQ9BPY3 351 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 ASB8Q9H765 288 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 C10orf88Q9H8K7 445 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 B4GALT7Q9UBV7 327 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 FAM169AQ9Y6X4 670 aa13.87□□□□□ -0.19
CTHRC1-201ENST00000330295 TUBAL3A6NHL2 446 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 C2orf81A6NN90 581 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 CDK2AP1O14519 115 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ATP1B2P14415 290 aaPredicted RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC26A3P40879 764 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 NR0B1P51843 470 aaKnown RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 DMTNQ08495 405 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 PTPRCAPQ14761 206 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 HEPHL1Q6MZM0 1159 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ZNF585AQ6P3V2 769 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ZNF227Q86WZ6 799 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ZC3H7AQ8IWR0 971 aaKnown RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 SULF2Q8IWU5 870 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 LGI4Q8N135 537 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 LINC01555Q8NAE3 123 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 PIGTQ969N2 578 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 MVB12AQ96EY5 273 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 LRRC46Q96FV0 321 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 OXNAD1Q96HP4 312 aaPredicted RBP13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ZFYVE21Q9BQ24 234 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 FICDQ9BVA6 458 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 VPS37BQ9H9H4 285 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 MMP25Q9NPA2 562 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ADGRE2Q9UHX3 823 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 ZNF148Q9UQR1 794 aa13.86□□□□□ -0.19
CTHRC1-201ENST00000330295 KLF13Q9Y2Y9 288 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms