RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PHGDHO43175 533 aaKnown RBP26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 FOXS1O43638 330 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 AVPR1BP47901 424 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 KLC1Q07866 573 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 CSHL1Q14406 222 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 RBBP7Q16576 425 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 ASPGQ86U10 573 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 MFSD9Q8NBP5 474 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 SLC5A11Q8WWX8 675 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 MKKSQ9NPJ1 570 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 ATP13A2Q9NQ11 1180 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 MTRF1LQ9UGC7 380 aaKnown RBP26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 DYRK1BQ9Y463 629 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 MAP4K5Q9Y4K4 846 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 HS3ST3B1Q9Y662 390 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 PCSK5Q92824 1860 aa26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 SOCS6O14544 535 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 LCMT2O60294 686 aaKnown RBP26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 KLHL41O60662 606 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 STATHP02808 62 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 CCDC166P0CW27 439 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 RAB10P61026 200 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 TLE1Q04724 770 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 ZKSCAN8Q15776 578 aaPredicted RBP26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 VWA2Q5GFL6 755 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 THOC6Q86W42 341 aaKnown RBP26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 HPS6Q86YV9 775 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 PRSS58Q8IYP2 241 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 GALNT16Q8N428 558 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 AMER3Q8N944 861 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 SLC13A3Q8WWT9 602 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 NEIL2Q969S2 332 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 TM4SF19Q96DZ7 209 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 SARGQ9BW04 601 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 NUDT9Q9BW91 350 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 TRIM4Q9C037 500 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 EPN3Q9H201 632 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 C14orf105Q9NVL8 296 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 FBXL4Q9UKA2 621 aa26.24■■□□□ 1.79
ATPAF1-201ENST00000329231 ATP6V0D1P61421 351 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 AIMP2Q13155 320 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 TMEM214Q6NUQ4 689 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 KIRREL2Q6UWL6 708 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 SPATA6LQ8N4H0 392 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 TSNARE1Q96NA8 513 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 SMAD5Q99717 465 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 UNKQ9C0B0 810 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 TSPYL1Q9H0U9 437 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 C3orf18Q9UK00 162 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 SLC22A14Q9Y267 594 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 KCNE2Q9Y6J6 123 aa26.23■■□□□ 1.79
ATPAF1-201ENST00000329231 HELZ2Q9BYK8 2649 aaKnown RBP26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 TRBC2A0A5B9 178 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 H0YIG0 161 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 OR1F1O43749 312 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 FAM155BO75949 473 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 NSA2O95478 260 aaKnown RBP26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 SLC35G6P0C7Q6 338 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 SOX8P57073 446 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 MEF2AQ02078 507 aaPredicted RBP26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 MYBPC3Q14896 1274 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 TGFBIQ15582 683 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 CATSPEREQ5SY80 951 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 VWA5B1Q5TIE3 1220 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 RHBDF1Q96CC6 855 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 MACROD1Q9BQ69 325 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 TGIF2Q9GZN2 237 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 PELI2Q9HAT8 420 aa26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 MRPS2Q9Y399 296 aaKnown RBP26.22■■□□□ 1.79
ATPAF1-201ENST00000329231 DPM1O60762 260 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 ALPPP05187 535 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 CD1DP15813 335 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 PHBP35232 272 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 RAPSNQ13702 412 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 SLMAPQ14BN4 828 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 TUBB8Q3ZCM7 444 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 GPSM1Q86YR5 675 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 TCAIMQ8N3R3 496 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 OR9A4Q8NGU2 314 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 UBXN10Q96LJ8 280 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 C5AR2Q9P296 337 aa26.21■■□□□ 1.79
ATPAF1-201ENST00000329231 PYCARD-AS1I3L0S3 204 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 FFAR3O14843 346 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 GPR42O15529 346 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 CRABP2P29373 138 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 EMP2P54851 167 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 EFTUD2Q15029 972 aaKnown RBP eCLIP26.2■■□□□ 1.783e-6■■■■■ 41.9
ATPAF1-201ENST00000329231 CDKL4Q5MAI5 379 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 RAPH1Q70E73 1250 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 LAPTM4BQ86VI4 370 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 RELL1Q8IUW5 271 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 KCT2Q8NC54 265 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 OR11G2Q8NGC1 345 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 IFT81Q8WYA0 676 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 AIF1LQ9BQI0 150 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 ANKHQ9HCJ1 492 aa26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 GCN1Q92616 2671 aaKnown RBP26.2■■□□□ 1.78
ATPAF1-201ENST00000329231 NCF1BA6NI72 391 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 NCF1CA8MVU1 366 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 IDSB3KWA1 339 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms