RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RABL3Q5HYI8 236 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 RNF111Q6ZNA4 994 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 VN1R5Q7Z5H4 357 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 SPATA24Q86W54 205 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 C2orf73Q8N5S3 287 aaPredicted RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 GPBAR1Q8TDU6 330 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 EGLN2Q96KS0 407 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 LRGUKQ96M69 825 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 PRPF18Q99633 342 aaKnown RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 SERHLQ9NQF3 203 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 MCM8Q9UJA3 840 aa17.14■□□□□ 0.33
RAB39A-201ENST00000320578 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.14■□□□□ 0.33
RAB39A-201ENST00000320578 IGHV1OR15-9A0A0B4J2B8 117 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 ANKDD1BA6NHY2 528 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 F3P13726 295 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 HOXB9P17482 250 aaPredicted RBP17.13■□□□□ 0.33
RAB39A-201ENST00000320578 SESN3P58005 492 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 MRPS22P82650 360 aaKnown RBP17.13■□□□□ 0.33
RAB39A-201ENST00000320578 UBXN2BQ14CS0 331 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 UGT8Q16880 541 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 PROSER1Q86XN7 944 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 PQLC1Q8N2U9 271 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 ZNF740Q8NDX6 193 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 OR13H1Q8NG92 308 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 NUDT8Q8WV74 236 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 COQ8BQ96D53 544 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 RSRC1Q96IZ7 334 aaKnown RBP17.13■□□□□ 0.33
RAB39A-201ENST00000320578 KCTD14Q9BQ13 255 aaPredicted RBP17.13■□□□□ 0.33
RAB39A-201ENST00000320578 ACAT2Q9BWD1 397 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 GPR174Q9BXC1 333 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 EBPLQ9BY08 206 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 PAIP1Q9H074 479 aaKnown RBP17.13■□□□□ 0.33
RAB39A-201ENST00000320578 TMEM168Q9H0V1 697 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 VCX3BQ9H321 246 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 VAPAQ9P0L0 249 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 SNX13Q9Y5W8 968 aa17.13■□□□□ 0.33
RAB39A-201ENST00000320578 SPTY2D1-AS1A0A0U1RR47 76 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 SCAMP2O15127 329 aaKnown RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 NVLO15381 856 aaKnown RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 PCDH7O60245 1069 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 RASGRP1O95267 797 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 SLC7A1P30825 629 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 HPCAL1P37235 193 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ACTR1BP42025 376 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ACTR1AP61163 376 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 YBX1P67809 324 aaKnown RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CSNK1G2P78368 415 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ZNF763Q0D2J5 394 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ILF3Q12906 894 aaKnown RBP eCLIP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 DEPDC1Q5TB30 811 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 COMMD6Q7Z4G1 85 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 NRROSQ86YC3 692 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 TNIP2Q8NFZ5 429 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 MTERF3Q96E29 417 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 PPM1MQ96MI6 270 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ORAI3Q9BRQ5 295 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 MS4A8Q9BY19 250 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 MYNNQ9NPC7 610 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CUEDC1Q9NWM3 386 aaPredicted RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 C2orf42Q9NWW7 574 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 FBXL21Q9UKT6 434 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 PNMA8BQ9ULN7 279 aaPredicted RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 GMEB1Q9Y692 573 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 TRBC2A0A5B9 178 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 OR5K4A6NMS3 321 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 PEX1O43933 1283 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 SCN2BO60939 215 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 TGFB1P01137 390 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 AK4P27144 223 aaPredicted RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 GSTM5P46439 218 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ERFP50548 548 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 MEF2AQ02078 507 aaPredicted RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ZP2Q05996 745 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 RBBP5Q15291 538 aaKnown RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 IKBIPQ70UQ0 350 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 Q7L0L9 218 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 MSRB3Q8IXL7 192 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 SLC22A18ASQ8N1D0 253 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 TMEM132CQ8N3T6 1108 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CAMKK1Q8N5S9 505 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CADM4Q8NFZ8 388 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 NELL1Q92832 810 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 CCDC115Q96NT0 180 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 GSDMCQ9BYG8 508 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 ZNF624Q9P2J8 865 aaPredicted RBP17.12■□□□□ 0.33
RAB39A-201ENST00000320578 BTNL2Q9UIR0 455 aa17.12■□□□□ 0.33
RAB39A-201ENST00000320578 PCM1Q15154 2024 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 H7BY64 318 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 DFNA5O60443 496 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 CLEC3AO75596 197 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 CAPNS1P04632 268 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 COX7A2P14406 83 aa17.11■□□□□ 0.33
RAB39A-201ENST00000320578 PTPN6P29350 595 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms