RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ABHD18Q0P651 414 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 GRSF1Q12849 480 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 APOFQ13790 326 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CAPRIN1Q14444 709 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CLCA4Q14CN2 919 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PRSS53Q2L4Q9 553 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 FAM174BQ3ZCQ3 159 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 AASDHQ4L235 1098 aaPredicted RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 EXOSC6Q5RKV6 272 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 MRM1Q6IN84 353 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PIWIL3Q7Z3Z3 882 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 UBE3DQ7Z6J8 389 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CARM1Q86X55 608 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 TRAPPC5Q8IUR0 188 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CHERPQ8IWX8 916 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 C10orf111Q8N326 155 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 FAM156AQ8NDB6 213 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 NT5CQ8TCD5 201 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 GPBAR1Q8TDU6 330 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 N4BP2L2Q92802 583 aaPredicted RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 TM4SF19Q96DZ7 209 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 SMIM10Q96HG1 83 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CAMK1GQ96NX5 476 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PSD2Q9BQI7 771 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DCAF13Q9NV06 445 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DUSP12Q9UNI6 340 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DMTF1Q9Y222 760 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ANKRD12Q6UB98 2062 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 A0A0A6YYD5 115 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 TRBC2A0A5B9 178 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PRSS38A1L453 326 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 KRBA1A5PL33 1030 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 FCGR1AP12314 374 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PTX3P26022 381 aaPredicted RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 RPL3P39023 403 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CDKN2CP42773 168 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 NEK2P51955 445 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DGKQP52824 942 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PCBP4P57723 403 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 MRPS22P82650 360 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 VEZF1Q14119 521 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 HKDC1Q2TB90 917 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 NHSL2Q5HYW2 709 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ADNP2Q6IQ32 1131 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 USP51Q70EK9 711 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 SLC9B2Q86UD5 537 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PTOV1Q86YD1 416 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ZFP28Q8NHY6 868 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 NUDT8Q8WV74 236 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 SMPDL3AQ92484 453 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ZBTB18Q99592 522 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DDX31Q9H8H2 851 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 USE1Q9NZ43 259 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 C5orf42Q9H799 3197 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 VILLO15195 856 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CLEC3AO75596 197 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 RASAL1O95294 804 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 TPP2P29144 1249 aaPredicted RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 TPMTP51580 245 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 PRKCQQ04759 706 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 STARD3Q14849 445 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 RPE65Q16518 533 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ZZZ3Q8IYH5 903 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ZFP90Q8TF47 636 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 BIRC7Q96CA5 298 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 RMND5AQ9H871 391 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 UCK1Q9HA47 277 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 CARS2Q9HA77 564 aaKnown RBP6.89□□□□□ -1.31
NPHP1-201ENST00000316534 ADA2Q9NZK5 511 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 BTBD3Q9Y2F9 522 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 DYRK1BQ9Y463 629 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 SZT2Q5T011 3432 aa6.89□□□□□ -1.31
NPHP1-201ENST00000316534 GABRR3A8MPY1 467 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 HPRP00739 348 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 OXTRP30559 389 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 AHRP35869 848 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 RAB28P51157 221 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 CRYBA2P53672 197 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 AQP4P55087 323 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 UBE2IP63279 158 aaKnown RBP6.88□□□□□ -1.31
NPHP1-201ENST00000316534 PRDX1Q06830 199 aaKnown RBP6.88□□□□□ -1.31
NPHP1-201ENST00000316534 TAF11Q15544 211 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 MAPKAPK3Q16644 382 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 TPRG1LQ5T0D9 272 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 SDE2Q6IQ49 451 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 C17orf82Q86X59 251 aaPredicted RBP6.88□□□□□ -1.31
NPHP1-201ENST00000316534 EID3Q8N140 333 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 LMNTD1Q8N9Z9 388 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 PJA1Q8NG27 643 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 FAM110BQ8TC76 370 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 RSC1A1Q92681 617 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 NELL1Q92832 810 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 TMEM38AQ9H6F2 299 aa6.88□□□□□ -1.31
NPHP1-201ENST00000316534 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms