RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SLC5A2P31639 672 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 SCTRP47872 440 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 SLC18A1P54219 525 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 WDR4P57081 412 aaKnown RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
APTX-201ENST00000309615 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 TMEM164Q5U3C3 297 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 ADNP2Q6IQ32 1131 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 CYB5D1Q6P9G0 228 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 ZCCHC23Q6ZST2 131 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 FRMD7Q6ZUT3 714 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 BPHLQ86WA6 291 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 TMEM126BQ8IUX1 230 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 ZNF655Q8N720 491 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 OR8K5Q8NH50 307 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 MGARPQ8TDB4 240 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 RERGQ96A58 199 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 PAIP2Q9BPZ3 127 aaKnown RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 MACROD1Q9BQ69 325 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 EFCAB11Q9BUY7 163 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 NTMT1Q9BV86 223 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 GATA5Q9BWX5 397 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 ZNF225Q9UK10 706 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 ZSCAN9O15535 394 aaPredicted RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 SCRG1O75711 98 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 CLDN9O95484 217 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 OTCP00480 354 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 ZNF28P17035 718 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 CYP4F2P78329 520 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 LCP2Q13094 533 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 CPSF6Q16630 551 aaKnown RBP eCLIP12.31□□□□□ -0.44
APTX-201ENST00000309615 HKDC1Q2TB90 917 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 HHATQ5VTY9 493 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 LIPJQ5W064 366 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 GRHL2Q6ISB3 625 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 LETMD1Q6P1Q0 360 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.31□□□□□ -0.44
APTX-201ENST00000309615 LSMEM2Q8N112 164 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 TBC1D19Q8N5T2 526 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 CSNK1A1LQ8N752 337 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 L3MBTL4Q8NA19 623 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 OR4F6Q8NGB9 312 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 THAP11Q96EK4 314 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
APTX-201ENST00000309615 ULBP3Q9BZM4 244 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 NKIRAS1Q9NYS0 192 aa12.31□□□□□ -0.44
APTX-201ENST00000309615 NCOR2Q9Y618 2525 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 UBFD1O14562 309 aaKnown RBP12.3□□□□□ -0.44
APTX-201ENST00000309615 ZNF749O43361 778 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 ATP8B1O43520 1251 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 UGDHO60701 494 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 MLYCDO95822 493 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 NTRK1P04629 796 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 SERPIND1P05546 499 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 LAPTM5Q13571 262 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 PAGE2BQ5JRK9 111 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 TCTE1Q5JU00 501 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 MILR1Q7Z6M3 343 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 SYVN1Q86TM6 617 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 SLC38A9Q8NBW4 561 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 MDM1Q8TC05 714 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 SLC13A3Q8WWT9 602 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 TM4SF19Q96DZ7 209 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 ZNF382Q96SR6 550 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 ZPBPQ9BS86 351 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
APTX-201ENST00000309615 ZFP69BQ9UJL9 534 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 RUVBL1Q9Y265 456 aaKnown RBP12.3□□□□□ -0.44
APTX-201ENST00000309615 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 AP1M2Q9Y6Q5 423 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 AKAP13Q12802 2813 aa12.3□□□□□ -0.44
APTX-201ENST00000309615 FITM1A5D6W6 292 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 BIRC5O15392 142 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 NDUFS4O43181 175 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 KIAA0754O94854 1291 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 MED26O95402 600 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 AHRP35869 848 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 HNF4AP41235 474 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 ASPHQ12797 758 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 HIST2H2ACQ16777 129 aaPredicted RBP12.29□□□□□ -0.44
APTX-201ENST00000309615 PRTGQ2VWP7 1150 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 MED27Q6P2C8 311 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 TLDC1Q6P9B6 456 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 GPRIN3Q6ZVF9 776 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 VN1R5Q7Z5H4 357 aa12.29□□□□□ -0.44
APTX-201ENST00000309615 ASPGQ86U10 573 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms