RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.91■□□□□ 0.62
VEGFB-201ENST00000309422 G3BP2Q9UN86 482 aaKnown RBP18.91■□□□□ 0.62
VEGFB-201ENST00000309422 PTRH2Q9Y3E5 179 aaKnown RBP18.91■□□□□ 0.62
VEGFB-201ENST00000309422 V9GYY5 206 aaPredicted RBP18.91■□□□□ 0.62
VEGFB-201ENST00000309422 HMX2A2RU54 273 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 NKX2-8O15522 239 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 ALBP02768 609 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 CTSBP07858 339 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 KRT15P19012 456 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 F8A1P23610 371 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 GGT5P36269 586 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 GDF5P43026 501 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 MAGEA12P43365 314 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 CYP4F2P78329 520 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 REEP5Q00765 189 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 LAPTM5Q13571 262 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 HKDC1Q2TB90 917 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 PRTGQ2VWP7 1150 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 CATSPEREQ5SY80 951 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 WDR93Q6P2C0 686 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 KLHDC8AQ8IYD2 350 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 TRPV3Q8NET8 790 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 UBE2E3Q969T4 207 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 IP6K3Q96PC2 410 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 ATOH8Q96SQ7 321 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 TMEM79Q9BSE2 394 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 CD244Q9BZW8 370 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 ANKHQ9HCJ1 492 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 ZNF282Q9UDV7 671 aaPredicted RBP18.9■□□□□ 0.62
VEGFB-201ENST00000309422 TBK1Q9UHD2 729 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 SH2B3Q9UQQ2 575 aa18.9■□□□□ 0.62
VEGFB-201ENST00000309422 LAMA5O15230 3695 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 SMIM23A6NLE4 172 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 K7EPI3 171 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 PEX12O00623 359 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 IGHEP01854 428 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 SFTPCP11686 197 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 EPB42P16452 691 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 WT1P19544 449 aaPredicted RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 AHRP35869 848 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ARL1P40616 181 aaPredicted RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 BCL6P41182 706 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ALDH18A1P54886 795 aaKnown RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 RPS18P62269 152 aaKnown RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 MEF2AQ02078 507 aaPredicted RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 IRF8Q02556 426 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 DLG1Q12959 904 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 PWP1Q13610 501 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 FAM53BQ14153 422 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 PFKFB4Q16877 469 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 UGT8Q16880 541 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 DEFB109BQ30KR1 87 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 XKR6Q5GH73 641 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ZNF385CQ66K41 422 aaPredicted RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ATG9BQ674R7 924 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ABHD13Q7L211 337 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ACMSDQ8TDX5 336 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 UBTD2Q8WUN7 234 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 CCT6BQ92526 530 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 MMABQ96EY8 250 aaPredicted RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 EFCAB11Q9BUY7 163 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 MRPL46Q9H2W6 279 aaKnown RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 EHD1Q9H4M9 534 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 WDR54Q9H977 334 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 XPR1Q9UBH6 696 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 ZFP69BQ9UJL9 534 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 PTBP2Q9UKA9 531 aaKnown RBP18.89■□□□□ 0.61
VEGFB-201ENST00000309422 MAU2Q9Y6X3 613 aa18.89■□□□□ 0.61
VEGFB-201ENST00000309422 TERTO14746 1132 aaKnown RBP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 CDH16O75309 829 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 C1GALT1C1LP0DN25 315 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 TAC1P20366 129 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 OR1D4P47884 311 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 DSG2Q14126 1118 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 SLBPQ14493 270 aaKnown RBP eCLIP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 HERC3Q15034 1050 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 TIFABQ6ZNK6 161 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 OR4K1Q8NGD4 311 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 OR2Y1Q8NGV0 311 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 ZCCHC10Q8TBK6 192 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 APOBEC4Q8WW27 367 aaKnown RBP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 PTCD3Q96EY7 689 aaKnown RBP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 SEC16BQ96JE7 1060 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 C10orf90Q96M02 699 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 MRPL57Q9BQC6 102 aaKnown RBP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 AKIRIN1Q9H9L7 192 aaPredicted RBP18.88■□□□□ 0.61
VEGFB-201ENST00000309422 C14orf105Q9NVL8 296 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 CACNA1BQ00975 2339 aa18.88■□□□□ 0.61
VEGFB-201ENST00000309422 A0A088AWK7 358 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 ANKDD1BA6NHY2 528 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 ZNF10P21506 573 aaPredicted RBP18.87■□□□□ 0.61
VEGFB-201ENST00000309422 OTX2P32243 289 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 GMPRP36959 345 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 SCTRP47872 440 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 RRADP55042 308 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 STXBP1P61764 594 aaKnown RBP18.87■□□□□ 0.61
VEGFB-201ENST00000309422 PHEXP78562 749 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 SETDB1Q15047 1291 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 C18orf21Q32NC0 220 aaPredicted RBP18.87■□□□□ 0.61
VEGFB-201ENST00000309422 TECRLQ5HYJ1 363 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms