RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DHCR24Q15392 516 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 PPCDCQ96CD2 204 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ANAPC1Q9H1A4 1944 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 FGBP02675 491 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ITGB8P26012 769 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 TIA1P31483 386 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDH8-201ENST00000299345 PLA2G16P53816 162 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 TBPL1P62380 186 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CTBSQ01459 385 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 C2orf80Q0P641 193 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CTU2Q2VPK5 515 aaKnown RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ACAT2Q9BWD1 397 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 BRF2Q9HAW0 419 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 MIEF1Q9NQG6 463 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 SPATA6Q9NWH7 488 aaPredicted RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 NDUFS2O75306 463 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ADH1CP00326 375 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ADH5P11766 374 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ISL1P61371 349 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CDK5R2Q13319 367 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ADNP2Q6IQ32 1131 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CEP68Q76N32 757 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 PARS2Q7L3T8 475 aaKnown RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 C2orf73Q8N5S3 287 aaPredicted RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 OR8D1Q8WZ84 308 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 OR51B5Q9H339 312 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 ASF1AQ9Y294 204 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 TLL1O43897 1013 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 CTSLP07711 333 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 HLA-EP13747 358 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 JUNBP17275 347 aaPredicted RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 PTPN6P29350 595 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 GZMMP51124 257 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 VLDLRP98155 873 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH8-201ENST00000299345 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH8-201ENST00000299345 MAL2Q969L2 176 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 FAM32AQ9Y421 112 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 SEC14L2O76054 403 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH8-201ENST00000299345 MMP12P39900 470 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ELP6Q0PNE2 266 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 TEAD4Q15561 434 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 NPTX1Q15818 432 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ZC3H12BQ5HYM0 836 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 CATSPEREQ5SY80 951 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 CYP4Z1Q86W10 505 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 WFIKKN2Q8TEU8 576 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ZNF480Q8WV37 535 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 CNDP2Q96KP4 475 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 MYOCQ99972 504 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 VNN3Q9NY84 501 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 BTBD3Q9Y2F9 522 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 SLC5A10A0PJK1 596 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 SLC16A6O15403 523 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 NUDT7P0C024 238 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 EPCAMP16422 314 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 MEF2AQ02078 507 aaPredicted RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 VEZF1Q14119 521 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ZNF77Q15935 545 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 SVOPQ8N4V2 548 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 NUS1Q96E22 293 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 CCDC177Q9NQR7 707 aaPredicted RBP13.12□□□□□ -0.31
CDH8-201ENST00000299345 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 TESMINQ9Y4I5 508 aa13.12□□□□□ -0.31
CDH8-201ENST00000299345 POP7O75817 140 aaKnown RBP13.11□□□□□ -0.31
CDH8-201ENST00000299345 ETHE1O95571 254 aa13.11□□□□□ -0.31
CDH8-201ENST00000299345 OPN1SWP03999 348 aa13.11□□□□□ -0.31
CDH8-201ENST00000299345 RYKP34925 604 aa13.11□□□□□ -0.31
CDH8-201ENST00000299345 RPL3P39023 403 aaKnown RBP13.11□□□□□ -0.31
CDH8-201ENST00000299345 ZNF763Q0D2J5 394 aa13.11□□□□□ -0.31
CDH8-201ENST00000299345 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
CDH8-201ENST00000299345 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms