RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 RNF6Q9Y252 685 aa16.27■□□□□ 0.2
CHRNE-201ENST00000293780 PCDHB11Q9Y5F2 797 aa16.27■□□□□ 0.2
CHRNE-201ENST00000293780 TMEM202A6NGA9 273 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 GABRR3A8MPY1 467 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 C9P02748 559 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 CYP2A7P20853 494 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 RRM2P31350 389 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 PROX2Q3B8N5 592 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 ERICH5Q6P6B1 374 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 USP45Q70EL2 814 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.19
CHRNE-201ENST00000293780 FAM217AQ8IXS0 508 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 OR8J2Q8NGG1 315 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 ELMO1Q92556 727 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 PROX1Q92786 737 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 SCAMP4Q969E2 229 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 SIGLEC11Q96RL6 698 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 ZBTB20Q9HC78 741 aaPredicted RBP16.27■□□□□ 0.19
CHRNE-201ENST00000293780 PRM3Q9NNZ6 103 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 ATAD3AQ9NVI7 634 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 B4GALT6Q9UBX8 382 aa16.27■□□□□ 0.19
CHRNE-201ENST00000293780 EFCAB9A8MZ26 197 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 MPC1LP0DKB6 136 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PPP3CCP48454 512 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 SPINT3P49223 89 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 HNRNPFP52597 415 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PTPN5P54829 565 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 CCL23P55773 120 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 SNRPD1P62314 119 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 ABRQ12979 859 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 DOC2AQ14183 400 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 CCSMST1Q4G0I0 132 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 TPGS2Q68CL5 300 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 DPY19L3Q6ZPD9 716 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 FAM124AQ86V42 546 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PLD3Q8IV08 490 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 HS6ST3Q8IZP7 471 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 ECHDC3Q96DC8 303 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PITX2Q99697 317 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 DUSP26Q9BV47 211 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 FAM32AQ9Y421 112 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 SERTM1A2A2V5 107 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 EIF3FO00303 357 aaPredicted RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 GCM2O75603 506 aaPredicted RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 ACPPP15309 386 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 GJA1P17302 382 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 RAE1P78406 368 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 HKDC1Q2TB90 917 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 CMTM8Q8IZV2 173 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 CHST14Q8NCH0 376 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 CD99L2Q8TCZ2 262 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 MYLIPQ8WY64 445 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 TSEN34Q9BSV6 310 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
CHRNE-201ENST00000293780 OSGIN1Q9UJX0 560 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 TESMINQ9Y4I5 508 aa16.26■□□□□ 0.19
CHRNE-201ENST00000293780 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 OR2AG2A6NM03 316 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 E9PQ18 207 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 M0R082 166 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 OLFM2O95897 454 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 OPN1SWP03999 348 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 CKMP06732 381 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 ABCB1P08183 1280 aaPredicted RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SLC19A1P41440 591 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 GAB1Q13480 694 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 LINC00299Q6ZSB3 139 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SLC22A16Q86VW1 577 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 THOC6Q86W42 341 aaKnown RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 NAGSQ8N159 534 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 FIBINQ8TAL6 211 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 ZHX1-C8orf76Q96EF9 292 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 MED8Q96G25 268 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 MCCC1Q96RQ3 725 aaPredicted RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 CHST8Q9H2A9 424 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 RUBCNLQ9H714 662 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 CCNB1IP1Q9NPC3 277 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SLCO3A1Q9UIG8 710 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 INSL5Q9Y5Q6 135 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SGTAO43765 313 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SOD2P04179 222 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 EPHB3P54753 998 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 ACSM2AQ08AH3 577 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 PLEKHS1Q5SXH7 462 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 ACSM2BQ68CK6 577 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 TMCO2Q7Z6W1 182 aaPredicted RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 LILRA3Q8N6C8 439 aaPredicted RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 C1orf52Q8N6N3 182 aaKnown RBP16.25■□□□□ 0.19
CHRNE-201ENST00000293780 OR52J3Q8NH60 311 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 PSMA8Q8TAA3 256 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 COPS4Q9BT78 406 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 DCSTAMPQ9H295 470 aa16.25■□□□□ 0.19
CHRNE-201ENST00000293780 DSN1Q9H410 356 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms