RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SNAPC5O75971 98 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 SRFP11831 508 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 MAGEA2P43356 314 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GPX6P59796 221 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ADAM8P78325 824 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 KCNJ11Q14654 390 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 MFSD6LQ8IWD5 586 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 RBM12BQ8IXT5 1001 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 TCEAL4Q96EI5 215 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF334Q9HCZ1 680 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GKN1Q9NS71 199 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRORSD1PA6NEY8 169 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 NEMP2A6NFY4 417 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 A8MT66 165 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 K7EPI3 171 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 HTRA2O43464 458 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GABBR2O75899 941 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 CDK14O94921 469 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 PAPSS2O95340 614 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 APODP05090 189 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 LINGO3P0C6S8 592 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 FPR1P21462 350 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 AP1S1P61966 158 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GRM2Q14416 872 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF234Q14588 700 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 FBXO48Q5FWF7 155 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 IDNKQ5T6J7 187 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 FAM46CQ5VWP2 391 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF852Q6ZMS4 543 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 TSEN15Q8WW01 171 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 KLHL6Q8WZ60 621 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZUFSPQ96AP4 578 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 COL21A1Q96P44 957 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 CST11Q9H112 138 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 KCNK12Q9HB15 430 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 CCDC177Q9NQR7 707 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 MRTO4Q9UKD2 239 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 RBM7Q9Y580 266 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 LOC100130705A0A1B0GUX0 176 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 XKRYO14609 159 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 F11P03951 625 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 HMGN1P05114 100 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 CD2P06729 351 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 TACR2P21452 398 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GLDCP23378 1020 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 GPD2P43304 727 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRR5P85299 388 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZP2Q05996 745 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 KLF1Q13351 362 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 QSOX2Q6ZRP7 698 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 RANBP3LQ86VV4 465 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 NTAN1Q96AB6 310 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 MMP27Q9H306 513 aa11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-201ENST00000293748 CXorf49A8MYA2 514 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 TNFRSF10AO00220 468 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 WRBO00258 174 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CCL22O00626 93 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 DLDP09622 509 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 IFI30P13284 250 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CTSEP14091 401 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRKCHP24723 683 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 IRF9Q00978 393 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 FAM91A1Q658Y4 838 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ULK3Q6PHR2 472 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SERPINA13PQ6UXR4 307 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 LGI4Q8N135 537 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SCML4Q8N228 414 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CEP76Q8TAP6 659 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CNDP2Q96KP4 475 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SPACA7Q96KW9 195 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 FRMD6Q96NE9 622 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 A0A1W2PP18 115 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 LEFTY2O00292 366 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CFHP08603 1231 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 PIK3CBP42338 1070 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ARCN1P48444 511 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SMU1Q2TAY7 513 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ATP13A5Q4VNC0 1218 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CMPK2Q5EBM0 449 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 EIF5AL1Q6IS14 154 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CFAP52Q8N1V2 620 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 MARVELD2Q8N4S9 558 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC35F5Q8WV83 523 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 EXOSC8Q96B26 276 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ISOC1Q96CN7 298 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 C12orf66Q96MD2 445 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC30A2Q9BRI3 323 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRKAB1Q9Y478 270 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms