RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DRD4P21917 467 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 MMP8P22894 467 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DNASE1P24855 282 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CD1BP29016 333 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CDC25AP30304 524 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CA8P35219 290 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ENTPD1P49961 510 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CLCN3P51790 818 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 LOXL3P58215 753 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 UBE2IP63279 158 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 TPM4P67936 248 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 KLRC3Q07444 240 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 GRB14Q14449 540 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ALX1Q15699 326 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CHRNA6Q15825 494 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 KLHL40Q2TBA0 621 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 COL28A1Q2UY09 1125 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 FBXO43Q4G163 708 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 AASDHQ4L235 1098 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 ATP13A5Q4VNC0 1218 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 MPPE1Q53F39 396 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 KIAA1755Q5JYT7 1200 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
CD44-202ENST00000278385 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 FNDC7Q5VTL7 733 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 TMEM198Q66K66 360 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 NCR3LG1Q68D85 454 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 TXNRD3NBQ6F5E7 133 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DLEU7Q6UYE1 221 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SERINC5Q86VE9 423 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 GRAMD2AQ8IUY3 354 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SYCE1Q8N0S2 351 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CENPLQ8N0S6 344 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 Q8N1X5 172 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 PDPRQ8NCN5 879 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 OIT3Q8WWZ8 545 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 RLN3Q8WXF3 142 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 TRIB2Q92519 343 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 NSMAFQ92636 917 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 RAD54LQ92698 747 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ESAMQ96AP7 390 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 AP2M1Q96CW1 435 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 PABPC5Q96DU9 382 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 PTCD3Q96EY7 689 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 TMEM68Q96MH6 324 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SEPT5Q99719 369 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 SCNM1Q9BWG6 230 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SCAND2PQ9GZW5 306 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 VCX3BQ9H321 246 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 EPB41L5Q9HCM4 733 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SLCO1C1Q9NYB5 712 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CNOT2Q9NZN8 540 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 CD300AQ9UGN4 299 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ADAMTS5Q9UNA0 930 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 PLA2G4CQ9UP65 541 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 MGAT4BQ9UQ53 548 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 GAB2Q9UQC2 676 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ENTPD4Q9Y227 616 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
CD44-202ENST00000278385 ROBO3Q96MS0 1386 aa4.4□□□□□ -1.7
CD44-202ENST00000278385 OTOFQ9HC10 1997 aa4.4□□□□□ -1.7
CD44-202ENST00000278385 IGKV6D-41A0A0C4DH26 115 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 CENPVL1A0A0U1RR11 272 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 CCDC195A0A1B0GUA6 201 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 OR6C65A6NJZ3 312 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 HIP1O00291 1037 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 RRP8O43159 456 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 KLK8O60259 260 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 HBP1O60381 514 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 SNNO75324 88 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 KDM4BO94953 1096 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ZWINTO95229 277 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 NDUFB10O96000 172 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 OPN1LWP04000 364 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PRKAR1AP10644 381 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 FCER1AP12319 257 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 IL7RP16871 459 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 GJA1P17302 382 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 CYP11B2P19099 503 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ATP6V1C1P21283 382 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PRPH2P23942 346 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ANXA13P27216 316 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ACADLP28330 430 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 EPHA3P29320 983 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 BLKP51451 505 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 DGKQP52824 942 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 RPS7P62081 194 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 RPP38P78345 283 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 OCA2Q04671 838 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms