RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FAM149AA5PLN7 773 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 DPPA5A6NC42 116 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 EVPLLA8MZ36 301 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 FAM220BPB1ANY3 271 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 C2CD4DB7Z1M9 353 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 CXCR6O00574 342 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 LATO43561 262 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PCDH7O60245 1069 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 HOXC4P09017 264 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 ZCCHC18P0CG32 403 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PTX3P26022 381 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 CCT8P50990 548 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PPP2CBP62714 309 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PPP2CAP67775 309 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 ABHD18Q0P651 414 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 HKDC1Q2TB90 917 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 C6orf52Q5T4I8 152 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 IER5LQ5T953 404 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 INTS11Q5TA45 600 aaKnown RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 UGT2A3Q6UWM9 527 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF621Q6ZSS3 439 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 VN1R5Q7Z5H4 357 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 CAMKMTQ7Z624 323 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 FAM124AQ86V42 546 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PACRGLQ8N7B6 248 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 WDR48Q8TAF3 677 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 FIG4Q92562 907 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 SH3KBP1Q96B97 665 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 SCARF2Q96GP6 870 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 MRGPRX1Q96LB2 322 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 C12orf66Q96MD2 445 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 RNF145Q96MT1 663 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 CAMK1GQ96NX5 476 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PANX1Q96RD7 426 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PRPF18Q99633 342 aaKnown RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 OSGEPL1Q9H4B0 414 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 PELI2Q9HAT8 420 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 FZD3Q9NPG1 666 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 TAC3Q9UHF0 121 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 ATP6V1HQ9UI12 483 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 BTNL2Q9UIR0 455 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 MOSPD1Q9UJG1 213 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 SUFUQ9UMX1 484 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 EXO1Q9UQ84 846 aaKnown RBP9.22□□□□□ -0.93
TRIM55-201ENST00000276573 KCNK6Q9Y257 313 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 GPSM3Q9Y4H4 160 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 CEP290O15078 2479 aa9.22□□□□□ -0.93
TRIM55-201ENST00000276573 C5orf42Q9H799 3197 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 A0A1W2PPV9 198 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 SAC3D1A6NKF1 404 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CLIC1O00299 241 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CACNB4O00305 520 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 SOCS2O14508 198 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CREG1O75629 220 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 KLHL18O94889 574 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CPSF4O95639 269 aaKnown RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 LDLRP01130 860 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 POU3F3P20264 500 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CXCR2P25025 360 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 PHEXP78562 749 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 CLCA4Q14CN2 919 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 RBBP5Q15291 538 aaKnown RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ATP6AP1Q15904 470 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 FAM98BQ52LJ0 330 aaKnown RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ANXA8L1Q5VT79 327 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 OR52E8Q6IFG1 317 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ANKRD26P1Q6NSI1 321 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 DUS1LQ6P1R4 473 aaKnown RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF551Q7Z340 670 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-201ENST00000276573 COMMD6Q7Z4G1 85 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 SPRED1Q7Z699 444 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 C10orf111Q8N326 155 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ABHD11Q8NFV4 315 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 OR4K1Q8NGD4 311 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 PHF12Q96QT6 1004 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 MYOCQ99972 504 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 C9orf16Q9BUW7 83 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 UGT2B28Q9BY64 529 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 RHBGQ9H310 441 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 REEP4Q9H6H4 257 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 NT5DC2Q9H857 520 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 WASH6PQ9NQA3 447 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 UBAP1Q9NZ09 502 aa9.21□□□□□ -0.93
TRIM55-201ENST00000276573 ARHGAP10A1A4S6 786 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 POM121BA6NF01 834 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.94
TRIM55-201ENST00000276573 SAP18O00422 153 aaKnown RBP9.21□□□□□ -0.94
TRIM55-201ENST00000276573 ACOX3O15254 700 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 RAP2AP10114 183 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 ACADMP11310 421 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 ENGP17813 658 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 GPX2P18283 190 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 HPCAL1P37235 193 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CCR8P51685 355 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms