RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 DHRS4L2Q6PKH6 230 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 CEP68Q76N32 757 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 GRASPQ7Z6J2 395 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 VTCN1Q7Z7D3 282 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 TMPRSS11BQ86T26 416 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 MRPL43Q8N983 215 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SNX19Q92543 992 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 FOPNLQ96NB1 174 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SAMD11Q96NU1 681 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 TUBA1CQ9BQE3 449 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 DUSP26Q9BV47 211 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 RIBC2Q9H4K1 309 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 CDH7Q9ULB5 785 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 ERVK-11Q9UQG0 969 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 H0YIV9 168 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 ANXA4P09525 319 aaPredicted RBP12.44□□□□□ -0.42
CPSF6-201ENST00000266679 JUNBP17275 347 aaPredicted RBP12.44□□□□□ -0.42
CPSF6-201ENST00000266679 DGKGP49619 791 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 GALK1P51570 392 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 RAD23AP54725 363 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 EMP3P54852 163 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 FGD3Q5JSP0 725 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 CPZQ66K79 652 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 LAIR2Q6ISS4 152 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 VN1R2Q8NFZ6 395 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 B4GALNT2Q8NHY0 566 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 POF1BQ8WVV4 589 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 HSH2DQ96JZ2 352 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 LHPPQ9H008 270 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 DKK3Q9UBP4 350 aa12.44□□□□□ -0.42
CPSF6-201ENST00000266679 SLC1A7O00341 560 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 NPC1O15118 1278 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 CYP17A1P05093 508 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 FABP3P05413 133 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HTR1AP08908 422 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PCSK2P16519 638 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 CD247P20963 164 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 ENTPD1P49961 510 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
CPSF6-201ENST00000266679 IL5RAQ01344 420 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF33BQ06732 778 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 BIRC2Q13490 618 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 DHCR24Q15392 516 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PRSS36Q5K4E3 855 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 OR2T5Q6IEZ7 315 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GPR155Q7Z3F1 870 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 KLHDC8AQ8IYD2 350 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 BPIFB6Q8NFQ5 453 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 OR8J2Q8NGG1 315 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 OR2T29Q8NH02 315 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 OR56A3Q8NH54 315 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HUS1BQ8NHY5 278 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
CPSF6-201ENST00000266679 NEIL2Q969S2 332 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 FAM83CQ9BQN1 747 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 TM9SF3Q9HD45 589 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 RPS6KA6Q9UK32 745 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 FAF1Q9UNN5 650 aaPredicted RBP12.43□□□□□ -0.42
CPSF6-201ENST00000266679 SH2B3Q9UQQ2 575 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PCDHB11Q9Y5F2 797 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PCM1Q15154 2024 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PLK4O00444 970 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 SEC14L2O76054 403 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 NUDT7P0C024 238 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 ADH5P11766 374 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HSD3B1P14060 373 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 IL9P15248 144 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GPX2P18283 190 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HSD3B2P26439 372 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GSTM2P28161 218 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 KDELR2P33947 212 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 HPCAL1P37235 193 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GABARAPL2P60520 117 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 TBPL1P62380 186 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 VLDLRP98155 873 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 CAMK1Q14012 370 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 STARD3Q14849 445 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 CPTPQ5TA50 214 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
CPSF6-201ENST00000266679 ERICH5Q6P6B1 374 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 SYTL1Q8IYJ3 562 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 CNIH3Q8TBE1 160 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 NRBF2Q96F24 287 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GABARAPL1Q9H0R8 117 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 TPT1P8Q9HAU6 139 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 BRF2Q9HAW0 419 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 FBXO10Q9UK96 956 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 BLOC1S6Q9UL45 172 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 IRAK3Q9Y616 596 aa12.43□□□□□ -0.42
CPSF6-201ENST00000266679 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 GABRR3A8MPY1 467 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 H3BM21 787 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms