RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 OR13F1Q8NGS4 319 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 L3HYPDHQ96EM0 354 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 TM9SF3Q9HD45 589 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 MRPL39Q9NYK5 338 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF224Q9NZL3 707 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SGTAO43765 313 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 CRHBPP24387 322 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 HNRNPFP52597 415 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 TEAD4Q15561 434 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 TAF1AQ15573 450 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC14A2Q15849 920 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 CYBRD1Q53TN4 286 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ENPP6Q6UWR7 440 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SYVN1Q86TM6 617 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 TMEM173Q86WV6 379 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 DTWD1Q8N5C7 304 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ZBTB2Q8N680 514 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 LMAN2LQ9H0V9 348 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 MED28Q9H204 178 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 C14orf119Q9NWQ9 140 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC9A8Q9Y2E8 581 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 MGAMO43451 1857 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 B4GALT3O60512 393 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SLITRK5O94991 958 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 PTTG1O95997 202 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 IFNW1P05000 195 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF789Q5FWF6 425 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC38A2Q96QD8 506 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 KRCC1Q9NPI7 259 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 DNAJC11Q9NVH1 559 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 PAQR5Q9NXK6 330 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 MARCH4Q9P2E8 410 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 ANKMY1Q9P2S6 941 aa11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 MAGED1Q9Y5V3 778 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-201ENST00000266546 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 NEDD8-MDP1E9PL57 170 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 LEFTY2O00292 366 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 NUAK1O60285 661 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 CCNB2O95067 398 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 POP4O95707 220 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 PCSK2P16519 638 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 RPL3P39023 403 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 CSKP41240 450 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 DPY19L1Q2PZI1 675 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 RD3Q7Z3Z2 195 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 LGI4Q8N135 537 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 CELF5Q8N6W0 485 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 PNPLA1Q8N8W4 532 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 MRPL43Q8N983 215 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 FRS2Q8WU20 508 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 C3orf30Q96M34 536 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 BRD9Q9H8M2 597 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ZFYVE1Q9HBF4 777 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 TIGARQ9NQ88 270 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 TAS2R9Q9NYW1 312 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 MALT1Q9UDY8 824 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 IGLV3-10A0A075B6K4 115 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 KPNA3O00505 521 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF195O14628 629 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ENGP17813 658 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ASMTP46597 345 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 POM121L1PQ3SYA9 428 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 MPP7Q5T2T1 576 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 DUS1LQ6P1R4 473 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 CEP68Q76N32 757 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ZFAND4Q86XD8 727 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 MMAAQ8IVH4 418 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 TBC1D19Q8N5T2 526 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 DPP10Q8N608 796 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ATG10Q9H0Y0 220 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 POPDC3Q9HBV1 291 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 OSER1Q9NX31 292 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 COMMD3Q9UBI1 195 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 GGT1P19440 569 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 BLVRAP53004 296 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC7A9P82251 487 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 RAPSNQ13702 412 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 MANEALQ5VSG8 457 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 OR4F3Q6IEY1 312 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 GOLGA7Q7Z5G4 137 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 CPXM2Q8N436 756 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF671Q8TAW3 534 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ALPK1Q96QP1 1244 aa11.18□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF382Q96SR6 550 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms