RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CLCA3PQ9Y6N3 262 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 MPC1LP0DKB6 136 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 ZNF12P17014 697 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 FPR1P21462 350 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 CLCN7P51798 805 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 LIPJQ5W064 366 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 P2RY13Q9BPV8 354 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 PRRG4Q9BZD6 226 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 CKLFQ9UBR5 152 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 PHF11Q9UIL8 331 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SLC16A5O15375 505 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 REM1O75628 298 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 CD70P32970 193 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 DMPKQ09013 629 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 IL18Q14116 193 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 NDUFA5Q16718 116 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 IL4I1Q96RQ9 567 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 TRIB3Q96RU7 358 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SFXN1Q9H9B4 322 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 AXIN1O15169 862 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 EIF4HQ15056 248 aaKnown RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 TMEM44Q2T9K0 475 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 PLET1Q6UQ28 207 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 HTRA1Q92743 480 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 POFUT2Q9Y2G5 429 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 WBP11Q9Y2W2 641 aaKnown RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 SOCS7O14512 581 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 IL4RP24394 825 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 MLLT3P42568 568 aaPredicted RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 VEGFBP49765 207 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 RBM48Q5RL73 367 aaKnown RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 LIN54Q6MZP7 749 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 POLR2J2Q9GZM3 115 aaKnown RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 IDH3BO43837 385 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 RPLP0P05388 317 aaKnown RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 C8orf89P0DMQ9 161 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 CTSAP10619 480 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 BMPR1AP36894 532 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 MNDAP41218 407 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 CDH15P55291 814 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 OR4D1Q15615 310 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 NPTX1Q15818 432 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 C10orf62Q5T681 223 aaPredicted RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 ADGRG6Q86SQ4 1221 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 LRRC17Q8N6Y2 441 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 FIBINQ8TAL6 211 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 ZUFSPQ96AP4 578 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 C11orf24Q96F05 449 aaPredicted RBP13.55□□□□□ -0.24
CDH3-201ENST00000264012 C17orf62Q9BQA9 187 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
CDH3-201ENST00000264012 FAM240BA0A1B0GVZ2 78 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 A0A1W2PP55 124 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 KLHL24Q6TFL4 600 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 TCEAL8Q8IYN2 117 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 STON2Q8WXE9 905 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 YTHDF1Q9BYJ9 559 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 PNO1Q9NRX1 252 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 MAGEB3O15480 346 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 KAT7O95251 611 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 BPIP17213 487 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 AHCYP23526 432 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 CRTC2Q53ET0 693 aaPredicted RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 TSEN15Q8WW01 171 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 AURKBQ96GD4 344 aaPredicted RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 REEP4Q9H6H4 257 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 SAGE2PA6NJ88 616 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 CLDN25C9JDP6 229 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 AREL1O15033 823 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 PDYNP01213 254 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 HMGN1P05114 100 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 S100A1P23297 94 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 ARFIP1P53367 373 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 SFT2D3Q587I9 215 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 EGFLAMQ63HQ2 1017 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 OR56A1Q8NGH5 318 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 DGAT2Q96PD7 388 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 CPED1A4D0V7 1026 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 A8MUA0 341 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms