RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLBPQ14493 270 aaKnown RBP eCLIP17.53■□□□□ 0.4
SDF4-201ENST00000263741 NAA25Q14CX7 972 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 PCBP2Q15366 365 aaKnown RBP eCLIP17.53■□□□□ 0.41e-9■■■□□ 15.4
SDF4-201ENST00000263741 HKDC1Q2TB90 917 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 XKR6Q5GH73 641 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 ZC3H12BQ5HYM0 836 aaKnown RBP17.53■□□□□ 0.4
SDF4-201ENST00000263741 GTF2H2CQ6P1K8 395 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 IGF2-ASQ6U949 168 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 ZYG11AQ6WRX3 759 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 SLC38A9Q8NBW4 561 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 OR2A5Q96R48 311 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 ASPSCR1Q9BZE9 553 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 PLLPQ9Y342 182 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 SCN2AQ99250 2005 aa17.53■□□□□ 0.4
SDF4-201ENST00000263741 VGLL3A8MV65 326 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 STX16-NPEPL1H3BU86 382 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 STX16O14662 325 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 OR1F1O43749 312 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 MED26O95402 600 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 MYL2P10916 166 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 TAC1P20366 129 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 DRD4P21917 467 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 ATP5F1P24539 256 aaPredicted RBP17.52■□□□□ 0.4
SDF4-201ENST00000263741 CDH13P55290 713 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 SNRPNP63162 240 aaKnown RBP17.52■□□□□ 0.4
SDF4-201ENST00000263741 REEP5Q00765 189 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 TGIF1Q15583 401 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 VN1R4Q7Z5H5 301 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 OR4K1Q8NGD4 311 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 CDK15Q96Q40 435 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 ZBTB26Q9HCK0 441 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 SEMA4BQ9NPR2 832 aaPredicted RBP17.52■□□□□ 0.4
SDF4-201ENST00000263741 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.4
SDF4-201ENST00000263741 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 URB1O60287 2271 aaKnown RBP17.52■□□□□ 0.4
SDF4-201ENST00000263741 LAMA5O15230 3695 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 CFAP47Q6ZTR5 3102 aa17.52■□□□□ 0.4
SDF4-201ENST00000263741 CLGNO14967 610 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 ZSCAN9O15535 394 aaPredicted RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 ZNF749O43361 778 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 TYROBPO43914 113 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 RPS17P08708 135 aaKnown RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 CHN1P15882 459 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 EPB42P16452 691 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 NFKB2Q00653 900 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 CHIT1Q13231 466 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 DOC2AQ14183 400 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 CCDC153Q494R4 210 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.52■□□□□ 0.39
SDF4-201ENST00000263741 WASHC2DQ5SRD0 308 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 TIPARPQ7Z3E1 657 aaKnown RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 MYLK4Q86YV6 388 aaPredicted RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 GPR135Q8IZ08 494 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 GALNT6Q8NCL4 622 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 CCDC197Q8NCU1 140 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 OR52B6Q8NGF0 335 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 TEFMQ96QE5 360 aaKnown RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 MECRQ9BV79 373 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 PELI2Q9HAT8 420 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 DHCR7Q9UBM7 475 aaKnown RBP17.52■□□□□ 0.39
SDF4-201ENST00000263741 SERTAD3Q9UJW9 196 aa17.52■□□□□ 0.39
SDF4-201ENST00000263741 A0A1B0GTL3 188 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 PPP6CO00743 305 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 C1GALT1C1LP0DN25 315 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 ARL1P40616 181 aaPredicted RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 ERVPABLB-1P60509 514 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 HERVK_113P63132 956 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 IRF8Q02556 426 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 PCLAFQ15004 111 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 METTL27Q8N6F8 245 aaPredicted RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 CSNK1A1LQ8N752 337 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 ANKRD53Q8N9V6 530 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 ZNF578Q96N58 590 aaPredicted RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 ERVK-6Q9BXR3 956 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 NOL11Q9H8H0 719 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 IPPKQ9H8X2 491 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 GPRC5BQ9NZH0 403 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 SENP1Q9P0U3 644 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 TMCO1Q9UM00 188 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 PCDHGA4Q9Y5G9 962 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 TNPO3Q9Y5L0 923 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 OR7A17O14581 309 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 KATNA1O75449 491 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 CAPNS1P04632 268 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 CPA3P15088 417 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 HRH2P25021 359 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 GRK3P35626 688 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 RPS15AP62244 130 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 RBBP5Q15291 538 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 UNC50Q53HI1 259 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 C1orf189Q5VU69 101 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 ATG9BQ674R7 924 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 CYB5D1Q6P9G0 228 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.51■□□□□ 0.399e-7■■■■■ 51.2
SDF4-201ENST00000263741 ZCCHC14Q8WYQ9 949 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 RERGQ96A58 199 aaPredicted RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 AIF1LQ9BQI0 150 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 CCDC134Q9H6E4 229 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 AKIRIN1Q9H9L7 192 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms