RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ACBD5Q5T8D3 534 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF468Q5VIY5 522 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PDPK2PQ6A1A2 396 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 NET1Q7Z628 596 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CUZD1Q86UP6 607 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 LRRC49Q8IUZ0 686 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 TRAM1L1Q8N609 369 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 OR4C15Q8NGM1 316 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 GOT1L1Q8NHS2 421 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 DOK4Q8TEW6 326 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CA14Q9ULX7 337 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CCT8L1PA6NM43 557 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CCNT2O60583 730 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CELA2AP08217 269 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 VIPR1P32241 457 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ARL4AP40617 200 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 P2RY4P51582 365 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 AQP5P55064 265 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 RPL26P61254 145 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZFP36L1Q07352 338 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SEPT6Q14141 434 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 GPR19Q15760 415 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CTU2Q2VPK5 515 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 GRTP1Q5TC63 336 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 LMNTD2Q8IXW0 634 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ADGRG5Q8IZF4 528 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 APCDD1LQ8NCL9 501 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 NFAM1Q8NET5 270 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 OR4N2Q8NGD1 307 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ACMSDQ8TDX5 336 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 MAL2Q969L2 176 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SDCCAG3Q96C92 435 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 GBP5Q96PP8 586 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC28A3Q9HAS3 691 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 RPL26L1Q9UNX3 145 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TSC22D4Q9Y3Q8 395 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ARHGAP32A7KAX9 2087 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF814B7Z6K7 855 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CSF2P04141 144 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZGLP1P0C6A0 271 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 OR12D1P0DN82 309 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ARL1P40616 181 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SRSF11Q05519 484 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 LIPMQ5VYY2 423 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 BHLHE22Q8NFJ8 381 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TRMT61AQ96FX7 289 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 MANSC1Q9H8J5 431 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 NSMCE4AQ9NXX6 385 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 E9PLN8 166 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 J3QRE1 110 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 FCHO1O14526 889 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 PPP1R12AO14974 1030 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ESRRBO95718 433 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 IGKV3-11P04433 115 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 HOXB8P17481 243 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CSRP1P21291 193 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 HALP42357 657 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 RCN2Q14257 317 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SLMAPQ14BN4 828 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 VEPH1Q14D04 833 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SEC23BQ15437 767 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 PFKFB4Q16877 469 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 DNAJC22Q8N4W6 341 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SCG3Q8WXD2 468 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 LINGO1Q96FE5 620 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 MBOAT4Q96T53 435 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 PRSS27Q9BQR3 290 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 QPCTLQ9NXS2 382 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 COL6A6A6NMZ7 2263 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 FITM1A5D6W6 292 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TM9SF1O15321 606 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CHEK2O96017 543 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 LAMP1P11279 417 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC26A3P40879 764 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF135P52742 658 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 KLF10Q13118 480 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 C6orf118Q5T5N4 469 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM71E1Q6IPT2 247 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF765Q7L2R6 523 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF527Q8NB42 609 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 UCMAQ8WVF2 138 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 MTBPQ96DY7 904 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 DPH2Q9BQC3 489 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 ATG10Q9H0Y0 220 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 TFB2MQ9H5Q4 396 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CATSPERBQ9H7T0 1116 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 CXorf36Q9H7Y0 433 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 MAN2B2Q9Y2E5 1009 aa5.35□□□□□ -1.55
TOPBP1-201ENST00000260810 GLYATL1P3A0A0U1RQE8 302 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 H0Y626 953 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ONECUT2O95948 504 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 SNRPAP09012 282 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms