RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SF3A3Q12874 501 aaKnown RBP eCLIP19.83■□□□□ 0.77
RTCA-201ENST00000260563 CHIT1Q13231 466 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 KCNAB1Q14722 419 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 ZNF425Q6IV72 752 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 CYB5D1Q6P9G0 228 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 PIGWQ7Z7B1 504 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 CDYL2Q8N8U2 506 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 RFWD2Q8NHY2 731 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 MAGEB10Q96LZ2 347 aaPredicted RBP19.83■□□□□ 0.77
RTCA-201ENST00000260563 PRAP1Q96NZ9 151 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 CHRNA10Q9GZZ6 450 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 FANCEQ9HB96 536 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 TMEM184CQ9NVA4 438 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 OCIAD1Q9NX40 245 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 SIDT1Q9NXL6 827 aaKnown RBP19.83■□□□□ 0.77
RTCA-201ENST00000260563 VTI1BQ9UEU0 232 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 SATB2Q9UPW6 733 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 RNF11Q9Y3C5 154 aa19.83■□□□□ 0.77
RTCA-201ENST00000260563 SPTBN2O15020 2390 aa19.83■□□□□ 0.76
RTCA-201ENST00000260563 HDAC3O15379 428 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 NRP2O60462 931 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 PRAMEF4O60810 478 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 CAPN1P07384 714 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 JMJD7P0C870 316 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 UROSP10746 265 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 CCR8P51685 355 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 ACY1Q03154 408 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 GGTA1PQ4G0N0 100 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 XKR6Q5GH73 641 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 PRAMEF9Q5VWM5 478 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 LIPJQ5W064 366 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 FOXR1Q6PIV2 292 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 PAQR7Q86WK9 346 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 MYLK4Q86YV6 388 aaPredicted RBP19.82■□□□□ 0.76
RTCA-201ENST00000260563 L3MBTL4Q8NA19 623 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 PELI2Q9HAT8 420 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 FAM60AQ9NP50 221 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 DCTN4Q9UJW0 460 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 KLK13Q9UKR3 277 aa19.82■□□□□ 0.76
RTCA-201ENST00000260563 ZNF195O14628 629 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 PLD2O14939 933 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 WFS1O76024 890 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 ADRB1P08588 477 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 EZRP15311 586 aaKnown RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 ALOX15P16050 662 aaPredicted RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 SERPINB3P29508 390 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 GRK3P35626 688 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 AQP5P55064 265 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 GABPB1Q06547 395 aaPredicted RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 FOXM1Q08050 763 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 TUBB3Q13509 450 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 TERF2Q15554 542 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 DEFB110Q30KQ9 67 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 UGT3A2Q3SY77 523 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 CATSPEREQ5SY80 951 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 GKAP1Q5VSY0 366 aaPredicted RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 FAM219BQ5XKK7 198 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 ATG9BQ674R7 924 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 NXPE4Q6UWF7 544 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 ABHD11Q8NFV4 315 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 METTL6Q8TCB7 284 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 N4BP2L2Q92802 583 aaPredicted RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 SCNM1Q9BWG6 230 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 KCNK13Q9HB14 408 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 PISDQ9UG56 409 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 TIMM22Q9Y584 194 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 DNAJC15Q9Y5T4 150 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 A0A0G2JND7 137 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 HAT1O14929 419 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 CCL4P13236 92 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 FOLR1P15328 257 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 ITIH1P19827 911 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 CASP2P42575 452 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 CSNK1G2P78368 415 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 DOC2AQ14183 400 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 E2F2Q14209 437 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 TBCCQ15814 346 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 PDCD2Q16342 344 aaPredicted RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 ZC3H12BQ5HYM0 836 aaKnown RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 SLCO4C1Q6ZQN7 724 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 RNF44Q7L0R7 432 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 MAVSQ7Z434 540 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 BMPERQ8N8U9 685 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 TWIST2Q8WVJ9 160 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 WDR34Q96EX3 536 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 PTCD3Q96EY7 689 aaKnown RBP19.81■□□□□ 0.76
RTCA-201ENST00000260563 OR6C1Q96RD1 312 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 ZFYVE21Q9BQ24 234 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 EHD1Q9H4M9 534 aa19.81■□□□□ 0.76
RTCA-201ENST00000260563 KCNE1BA0A087WTH5 132 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 B4E171 279 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 CTSVO60911 334 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 SKAP2O75563 359 aaPredicted RBP19.8■□□□□ 0.76
RTCA-201ENST00000260563 CHEK2O96017 543 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 MSL3P1P0C860 447 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 C1GALT1C1LP0DN25 315 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 VARSP26640 1264 aaKnown RBP19.8■□□□□ 0.76
RTCA-201ENST00000260563 HMOX2P30519 316 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 TSPAN7P41732 249 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 MAPK10P53779 464 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms