RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GNAZP19086 355 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 HNMTP50135 292 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 TAF11Q15544 211 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 OR4D1Q15615 310 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 ZNF425Q6IV72 752 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 FBXO42Q6P3S6 717 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 LCTLQ6UWM7 567 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 ISCA2Q86U28 154 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 ENDOVQ8N8Q3 282 aaKnown RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 STAG3L4Q8TBR4 150 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 ISL2Q96A47 359 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 CCNL2Q96S94 520 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 SPRTNQ9H040 489 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-201ENST00000260130 IGSF5Q9NSI5 407 aa16.06■□□□□ 0.16
SDCBP-201ENST00000260130 SDK2Q58EX2 2172 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 WDR91A4D1P6 747 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 NRP2O60462 931 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 TGDSO95455 350 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 CTSBP07858 339 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 SNRPAP09012 282 aaKnown RBP16.05■□□□□ 0.16
SDCBP-201ENST00000260130 CCNYL3P0C7X3 344 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 TFEBP19484 476 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 HRH2P25021 359 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 IRF9Q00978 393 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 ABHD18Q0P651 414 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 FAM83EQ2M2I3 478 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 MANEAQ5SRI9 462 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 PAQR7Q86WK9 346 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 CENPLQ8N0S6 344 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-201ENST00000260130 SLC38A9Q8NBW4 561 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 HAUS8Q9BT25 410 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 ALG9Q9H6U8 611 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 CUEDC1Q9NWM3 386 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-201ENST00000260130 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 PADI1Q9ULC6 663 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 AP1M2Q9Y6Q5 423 aa16.05■□□□□ 0.16
SDCBP-201ENST00000260130 NCF1BA6NI72 391 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-201ENST00000260130 NCF1CA8MVU1 366 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-201ENST00000260130 TRIM49D1C9J1S8 452 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 H7BY64 318 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 ZNF749O43361 778 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 SRPX2O60687 465 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-201ENST00000260130 CCDC22O60826 627 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 NCF1P14598 390 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-201ENST00000260130 MAGEA12P43365 314 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 PTCHD3Q3KNS1 767 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 RNF44Q7L0R7 432 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 C17orf64Q86WR6 236 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 RHBDF1Q96CC6 855 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 CLIP3Q96DZ5 547 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 APOPT1Q96IL0 206 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 PRAP1Q96NZ9 151 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 ZFYVE21Q9BQ24 234 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 SLC7A5P2Q9GIP4 190 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 TMEM184CQ9NVA4 438 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 SLC17A7Q9P2U7 560 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 NKX1-2Q9UD57 310 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-201ENST00000260130 DCTN4Q9UJW0 460 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 RNF112Q9ULX5 631 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 A0A0J9YVX5 310 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 GOLGA8RI6L899 631 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 KLHL2O95198 593 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 KCNC1P48547 511 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 UCNP55089 124 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 RELAQ04206 551 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 TCTE1Q5JU00 501 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 CDKL4Q5MAI5 379 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 ADCK2Q7Z695 626 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 VASH2Q86V25 355 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 TEX9Q8N6V9 391 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 LRFN5Q96NI6 719 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 LRRC42Q9Y546 428 aa16.04■□□□□ 0.16
SDCBP-201ENST00000260130 ZSCAN9O15535 394 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 HBQ1P09105 142 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 DHRS4L1P0CG22 281 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 STAT5AP42229 794 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 ARFIP2P53365 341 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 SLC18A2Q05940 514 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 ACAP2Q15057 778 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 FRMPD2BQ6IN97 320 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 C19orf48Q6RUI8 117 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 ZNF655Q8N720 491 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 RFWD2Q8NHY2 731 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 MTBPQ96DY7 904 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 ZNF285Q96NJ3 590 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 OR4K3Q96R72 315 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 DCLRE1BQ9H816 532 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 LHX9Q9NQ69 397 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 CD274Q9NZQ7 290 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 SH2B3Q9UQQ2 575 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 SNRNP200O75643 2136 aaKnown RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 A0A0G2JND7 137 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 LOC101059948A0A1B0GTJ6 334 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 EFSO43281 561 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 KLK3P07288 261 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 NEFHP12036 1026 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 VSX2P58304 361 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms