RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 WFDC5Q8TCV5 224 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 NECTIN3Q9NQS3 549 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 TMEM184CQ9NVA4 438 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 TBC1D14Q9P2M4 693 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF221Q9UK13 617 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 PCDH7O60245 1069 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 BPIP17213 487 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 EPORP19235 508 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 PREPP48147 710 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 EIF4EBP2Q13542 120 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 ACOX1Q15067 660 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 DGKKQ5KSL6 1271 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 ARMCX6Q7L4S7 300 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 NIPSNAP1Q9BPW8 284 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 SMG9Q9H0W8 520 aaKnown RBP11.58□□□□□ -0.56
USHBP1-201ENST00000252597 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 TM9SF3Q9HD45 589 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 IL1RAPQ9NPH3 570 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 NOX1Q9Y5S8 564 aa11.58□□□□□ -0.56
USHBP1-201ENST00000252597 ARID1BQ8NFD5 2236 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PRUNE2Q8WUY3 3088 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CCRL2O00421 344 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ZW10O43264 779 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TNNI3P19429 210 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 EIF2DP41214 584 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PCBP2Q15366 365 aaKnown RBP eCLIP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ATP13A5Q4VNC0 1218 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ZMAT1Q5H9K5 638 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CPTPQ5TA50 214 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TXNDC8Q6A555 127 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 NEK5Q6P3R8 708 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SERINC5Q86VE9 423 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CYP4Z2PQ8N1L4 340 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 DEPDC4Q8N2C3 294 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CELF5Q8N6W0 485 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF366Q8N895 744 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PHF10Q8WUB8 498 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 RDH12Q96NR8 316 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 GFM1Q96RP9 751 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CCM2Q9BSQ5 444 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TRPV5Q9NQA5 729 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PLSCR3Q9NRY6 295 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 A0A1B0GVM2 712 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 AGAP5A6NIR3 686 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 DRGXA6NNA5 263 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CENPXA8MT69 81 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 RFXAPO00287 272 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CTGFP29279 349 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 MC1RQ01726 317 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 RUNX1T1Q06455 604 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 EXOC3L2Q2M3D2 409 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SYTL3Q4VX76 610 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ATG9BQ674R7 924 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 EIF3MQ7L2H7 374 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CACUL1Q86Y37 369 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 KLHDC8BQ8IXV7 354 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SLC22A12Q96S37 553 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SGK2Q9HBY8 427 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PAQR5Q9NXK6 330 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 GUCY1B2O75343 617 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 WBP4O75554 376 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 AP2A2O94973 939 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TGFB1P01137 390 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 IGFBP1P08833 259 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SLC15A1P46059 708 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TCEA2Q15560 299 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 LRIT3Q3SXY7 679 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 NXNL2Q5VZ03 156 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 FRG2Q64ET8 278 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 C17orf99Q6UX52 265 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF852Q6ZMS4 543 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 GDPD3Q7L5L3 318 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TMPRSS11BQ86T26 416 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 RTN4RL1Q86UN2 441 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 NFKBIDQ8NI38 313 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF486Q96H40 463 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-201ENST00000252597 C8orf48Q96LL4 319 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 FRG2BQ96QU4 278 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 DUSP26Q9BV47 211 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 SLC32A1Q9H598 525 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PDFQ9HBH1 243 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 CCNB1IP1Q9NPC3 277 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 TMED5Q9Y3A6 229 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 PCDHB1Q9Y5F3 818 aa11.57□□□□□ -0.56
USHBP1-201ENST00000252597 ILVBLA1L0T0 632 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 SLC35F4A4IF30 521 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 TMCC2O75069 709 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 STATHP02808 62 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms