RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 IL4I1Q96RQ9 567 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 MUC13Q9H3R2 512 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 C14orf105Q9NVL8 296 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ZNF510Q9Y2H8 683 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ARHGEF12Q9NZN5 1544 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ELOA3DA6NLF2 546 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 LIASO43766 372 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TGDSO95455 350 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CHRNB1P11230 501 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PLP2Q04941 152 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ZNF460Q14592 562 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ELOA3BQ3SY89 546 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 UBE2UQ5VVX9 321 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ARL9Q6T311 187 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ELOA3Q8NG57 546 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PIGXQ8TBF5 258 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TBX10O75333 385 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 SCGB1D1O95968 90 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 NOMO3P69849 1222 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TARDBPQ13148 414 aaKnown RBP eCLIP10.82□□□□□ -0.683e-8■■■■■ 32.2
MSH6-201ENST00000234420 NOMO1Q15155 1222 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PPA1Q15181 289 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ZNF705AQ6ZN79 300 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 MRPL41Q8IXM3 137 aaKnown RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 SLC15A3Q8IY34 581 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 GOLM1Q8NBJ4 401 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PTERQ96BW5 349 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 C11orf84Q9BUA3 381 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 TMEM27Q9HBJ8 222 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 LYARQ9NX58 379 aaKnown RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 TMEM150CB9EJG8 249 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SLITRK5O94991 958 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GADD45GO95257 159 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 MTHFD1P11586 935 aaKnown RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 FABP6P51161 128 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 KREMEN2Q8NCW0 462 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 RIT1Q92963 219 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SLC41A3Q96GZ6 507 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TPSD1Q9BZJ3 242 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 PLLPQ9Y342 182 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 NEMP2A6NFY4 417 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 E7EQ34 232 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 DGKGP49619 791 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 NUDT6P53370 316 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 C1QTNF8P60827 252 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 CCL14Q16627 93 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 FAM69BQ5VUD6 431 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 USP53Q70EK8 1073 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ZNF101Q8IZC7 436 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TERB2Q8NHR7 220 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ASF1BQ9NVP2 202 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 BORCS7-ASMTA0A0B4J1R7 106 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TXNDC12O95881 172 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ABOP16442 354 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 STT3AP46977 705 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GBX2P52951 348 aaPredicted RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 ARG2P78540 354 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GRIK2Q13002 908 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 LYPLAL1Q5VWZ2 237 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 NCEH1Q6PIU2 408 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 UNC5BQ8IZJ1 945 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SLC38A4Q969I6 547 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 OR1F2PQ96R84 312 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 FUCA2Q9BTY2 467 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 IL21RQ9HBE5 538 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 PCDHB10Q9UN67 800 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 MYH2Q9UKX2 1941 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 A0A0A0MRY4 1105 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SCDO00767 359 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 HOXB6P17509 224 aaKnown RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 RIDAP52758 137 aaKnown RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 FGL1Q08830 312 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GANABQ14697 944 aaKnown RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 SV2AQ7L0J3 742 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 APOLD1Q96LR9 279 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SPATA13Q96N96 652 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GPR174Q9BXC1 333 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TTTY10Q9BZA0 68 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SLC5A7Q9GZV3 580 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 EBF2Q9HAK2 575 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 FZD3Q9NPG1 666 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 NTSR2O95665 410 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ACTR1BP42025 376 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ID2Q02363 134 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 CLEC12AQ5QGZ9 265 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GATSQ8NAP1 163 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 BADQ92934 168 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 FN3KQ9H479 309 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 K7EPI3 171 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 SYPP08247 313 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 CD247P20963 164 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 RASGEF1BQ0VAM2 473 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 GALNT1Q10472 559 aaPredicted RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 NLRP8Q86W28 1048 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ZNF676Q8N7Q3 588 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms