RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TRIM36Q9NQ86 728 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 DNAJB4Q9UDY4 337 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 MLXQ9UH92 298 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 CDK6Q00534 326 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 ADAM15Q13444 863 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 CCL14Q16627 93 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 NADK2Q4G0N4 442 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 RPS27LQ71UM5 84 aaKnown RBP11.23□□□□□ -0.61
LAMA4-201ENST00000230538 ZNF366Q8N895 744 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 TM9SF2Q99805 663 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 FNIP2Q9P278 1114 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 GALPQ9UBC7 116 aa11.23□□□□□ -0.61
LAMA4-201ENST00000230538 HYKKA2RU49 373 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PMM2O15305 246 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 KDM4BO94953 1096 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 BMP8BP34820 402 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 CDH15P55291 814 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 SLC25A11Q02978 314 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 SPIN3Q5JUX0 258 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 BMP8AQ7Z5Y6 402 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ZNF227Q86WZ6 799 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 CELF5Q8N6W0 485 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 FAM46DQ8NEK8 389 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 OR4K17Q8NGC6 315 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PKP2Q99959 881 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 SCML2Q9UQR0 700 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 FMN2Q9NZ56 1722 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 A8MU76 341 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 MATN1P21941 496 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 NPY5RQ15761 445 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PAQR7Q86WK9 346 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 JAGN1Q8N5M9 183 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 TESCQ96BS2 214 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 MAPKAP1Q9BPZ7 522 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 DCSTAMPQ9H295 470 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 Q9N2J8 555 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 GNG8Q9UK08 70 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 UPK3BL1B0FP48 263 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 UPK3BL2E5RIL1 263 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 RAB36O95755 333 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 CH25HO95992 272 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PIM1P11309 404 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 GJA1P17302 382 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 FECHP22830 423 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ST3GAL3Q11203 375 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 OCLNQ16625 522 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 FBXO43Q4G163 708 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 MSS51Q4VC12 460 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ERI1Q8IV48 349 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 C15orf40Q8WUR7 153 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 EZH1Q92800 747 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 BARD1Q99728 777 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 YTHDF1Q9BYJ9 559 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 HPF1Q9NWY4 346 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PLEKHA6Q9Y2H5 1048 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 DUOX1Q9NRD9 1551 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 E7EQ34 232 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 POP7O75817 140 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 RPL10P27635 214 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PRMT2P55345 433 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PRR23BQ6ZRT6 265 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 TMCO2Q7Z6W1 182 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 SMPDL3AQ92484 453 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 EHD1Q9H4M9 534 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PLAGL1Q9UM63 463 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 A0A1W2PQ45 241 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 A0A1W2PQY0 241 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 EIF1AYO14602 144 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 DLX3O60479 287 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 MMP20O60882 483 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PIGRP01833 764 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 AHSGP02765 367 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ZNF30P17039 623 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 DECR1Q16698 335 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ARHGAP40Q5TG30 622 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ZC3HC1Q86WB0 502 aaKnown RBP11.22□□□□□ -0.61
LAMA4-201ENST00000230538 OR56A1Q8NGH5 318 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 OR5M3Q8NGP4 307 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PNPLA2Q96AD5 504 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 DPAGT1Q9H3H5 408 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 PCDHGB2Q9Y5G2 931 aa11.22□□□□□ -0.61
LAMA4-201ENST00000230538 HCRTO43612 131 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 KDELR3O43731 214 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 NUAK1O60285 661 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 PEPDP12955 493 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 DEFA5Q01523 94 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 SEMA3AQ14563 771 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 ZBED5Q49AG3 693 aa11.21□□□□□ -0.61
LAMA4-201ENST00000230538 LRRC66Q68CR7 880 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms