RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 ARHGEF39Q8N4T4 335 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 METTL27Q8N6F8 245 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 ANKRD53Q8N9V6 530 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 MFSD9Q8NBP5 474 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 C10orf90Q96M02 699 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLC22A11Q9NSA0 550 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 CUTCQ9NTM9 273 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 OPTCQ9UBM4 332 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 NDOR1Q9UHB4 597 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 DCDC2Q9UHG0 476 aa13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZNF490Q9ULM2 529 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 MRPS18BQ9Y676 258 aaKnown RBP13.74□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 CLGNO14967 610 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 CTIFO43310 598 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 DLX3O60479 287 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 H2AFYO75367 372 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 KLK3P07288 261 aaPredicted RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 GSTA1P08263 222 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 HBQ1P09105 142 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 CREB1P16220 341 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 CRHR1P34998 444 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 DLSTP36957 453 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 SCTRP47872 440 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 FOXL2P58012 376 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 REEP5Q00765 189 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLC18A2Q05940 514 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 15.6
SUPT4H1-201ENST00000225504 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 LRRC70Q7Z2Q7 622 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 SHISA5Q8N114 240 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 KCT2Q8NC54 265 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 RERGQ96A58 199 aaPredicted RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 NSUN5Q96P11 429 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 SARGQ9BW04 601 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 GPRC5BQ9NZH0 403 aa13.73□□□□□ -0.21
SUPT4H1-201ENST00000225504 CCDC151A5D8V7 595 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 A8MT66 165 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 E2F3O00716 465 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 DSCR3O14972 297 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 SMIM24O75264 130 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 KATNA1O75449 491 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 WFS1O76024 890 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 GRK3P35626 688 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 OR1D4P47884 311 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 ARSFP54793 590 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 CYP4F2P78329 520 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 CHIT1Q13231 466 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLBPQ14493 270 aaKnown RBP eCLIP13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 FAM214AQ32MH5 1076 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 ADNP2Q6IQ32 1131 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 GOLGA7Q7Z5G4 137 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 ASPGQ86U10 573 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 LCA5Q86VQ0 697 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 TTC29Q8NA56 475 aaPredicted RBP13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLC13A3Q8WWT9 602 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 WDR34Q96EX3 536 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 GPN2Q9H9Y4 310 aaPredicted RBP13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 MAU2Q9Y6X3 613 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 PKD1L2Q7Z442 2459 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 CCDC88CQ9P219 2028 aa13.72□□□□□ -0.21
SUPT4H1-201ENST00000225504 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 PPP6CO00743 305 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 STX16O14662 325 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 NKX2-8O15522 239 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 FOXS1O43638 330 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 CNOT3O75175 753 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 ERLIN1O75477 346 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 PROCP04070 461 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 SERPIND1P05546 499 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 EPB42P16452 691 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 TSPAN8P19075 237 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 IRF8Q02556 426 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 DNASE1L3Q13609 305 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 GTF2H2Q13888 395 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 COL28A1Q2UY09 1125 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 KRT71Q3SY84 523 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 NKAIN1Q4KMZ8 207 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 BROXQ5VW32 411 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 FAM219BQ5XKK7 198 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 GTF2H2CQ6P1K8 395 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 FAM198BQ6UWH4 519 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 CCDC81Q6ZN84 652 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 COX15Q7KZN9 410 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms