RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 YTHDF1Q9BYJ9 559 aaKnown RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 BTBD1Q9H0C5 482 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 MAGEE1Q9HCI5 957 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 TMLHEQ9NVH6 421 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 GPR32O75388 356 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 RSL1D1O76021 490 aaKnown RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 XKP51811 444 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 CDH15P55291 814 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SCAPQ12770 1279 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ERMP1Q7Z2K6 904 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 BIRC7Q96CA5 298 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 OTUB2Q96DC9 234 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ZNF641Q96N77 438 aaPredicted RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 MKKSQ9NPJ1 570 aaPredicted RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 CLCA3PQ9Y6N3 262 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 DAPL1A0PJW8 107 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 EFCAB9A8MZ26 197 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 KMOO15229 486 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 GRID2O43424 1007 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 BCHEP06276 602 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 RPS13P62277 151 aaKnown RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 CARTPTQ16568 116 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SUSD1Q6UWL2 747 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 DPY19L3Q6ZPD9 716 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ADGRG6Q86SQ4 1221 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SIX5Q8N196 739 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SLC5A11Q8WWX8 675 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 KCNK13Q9HB14 408 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SNTG1Q9NSN8 517 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TRNAU1APQ9NX07 287 aaKnown RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 DLGAP4Q9Y2H0 992 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 OR1I1O60431 355 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 MAFKO60675 156 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 AGR2O95994 175 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ALPPL2P10696 532 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 FPR1P21462 350 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TIGD6Q17RP2 521 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 OR10Q1Q8NGQ4 319 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 OR9A1PQ8NGU1 263 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 C9orf43Q8TAL5 461 aaPredicted RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 TMEM40Q8WWA1 233 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 STON2Q8WXE9 905 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 UFD1Q92890 307 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ZNF778Q96MU6 729 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ZNF382Q96SR6 550 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 NEUROD4Q9HD90 331 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TAS2R7Q9NYW3 318 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 UTS2RQ9UKP6 389 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TMEM98Q9Y2Y6 226 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 SPIN1Q9Y657 262 aaPredicted RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 PTGESO14684 152 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 DIRAS1O95057 198 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 HOXB2P14652 356 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TCEA1P23193 301 aaKnown RBP11.17□□□□□ -0.62
NOD1-201ENST00000222823 CSTF2P33240 577 aaKnown RBP eCLIP11.17□□□□□ -0.62
NOD1-201ENST00000222823 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
NOD1-201ENST00000222823 OLFML2AQ68BL7 652 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ZNF783Q6ZMS7 281 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 TRIM74Q86UV6 250 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 CDC14AQ9UNH5 594 aa11.17□□□□□ -0.62
NOD1-201ENST00000222823 ZNF840PA6NDX5 716 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 FAM25EA8MYX2 175 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 SDHDO14521 159 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 NPPAP01160 153 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZNF823P16415 610 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RFC2P35250 354 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ACADVLP49748 655 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ALDH3A2P51648 485 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 SP140Q13342 867 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 NADK2Q4G0N4 442 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 XKR4Q5GH76 650 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RBM48Q5RL73 367 aaKnown RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 KIAA1161Q6NSJ0 714 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 TRNP1Q6NT89 227 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ABHD13Q7L211 337 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 NUP54Q7Z3B4 507 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 CHST4Q8NCG5 386 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 OR4E2Q8NGC2 313 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 TSPEARQ8WU66 669 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 PYURFQ96I23 114 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 KCNC2Q96PR1 638 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 C1QTNF1Q9BXJ1 281 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 DSN1Q9H410 356 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ANKRA2Q9H9E1 313 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RIMKLBQ9ULI2 386 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 NUMA1Q14980 2115 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 STATHP02808 62 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 FESP07332 822 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms