RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 BTNL2Q9UIR0 455 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 USP22Q9UPT9 525 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 KCNK6Q9Y257 313 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 CFAP20Q9Y6A4 193 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PRSS38A1L453 326 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 TOR1BO14657 336 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 LATO43561 262 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 AKAP10O43572 662 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 DENRO43583 198 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 SEMA3DO95025 777 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 SCELO95171 688 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 NCK1P16333 377 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 GABRG2P18507 467 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 HNRNPA2B1P22626 353 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 FASP25445 335 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OXTRP30559 389 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PKLRP30613 574 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 RPL3P39023 403 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 CCR8P51685 355 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 MRPS35P82673 323 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF763Q0D2J5 394 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 ABHD18Q0P651 414 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 GTDC1Q4AE62 458 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 ANXA8L1Q5VT79 327 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 COMMD6Q7Z4G1 85 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OR10A6Q8NH74 314 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 OSGEPL1Q9H4B0 414 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 MYNNQ9NPC7 610 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 USP36Q9P275 1121 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 RAB26Q9ULW5 256 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 INVSQ9Y283 1065 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 GPSM3Q9Y4H4 160 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 HEBP2Q9Y5Z4 205 aa13.76□□□□□ -0.21
RTFDC1-201ENST00000023939 NUMA1Q14980 2115 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 PCM1Q15154 2024 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 TCRBV21S2A2A0A5A6 115 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 ELOVL7A1L3X0 281 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 POM121BA6NF01 834 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 GABRR3A8MPY1 467 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 GMNNO75496 209 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 TIPRLO75663 272 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 ZCCHC18P0CG32 403 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 PIM1P11309 404 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 HOXB6P17509 224 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 ACSL1P33121 698 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 YPEL5P62699 121 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 PDE7AQ13946 482 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 CLCA4Q14CN2 919 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 CPTPQ5TA50 214 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 DUS1LQ6P1R4 473 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 ABRAXAS1Q6UWZ7 409 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 DNAJC14Q6Y2X3 702 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 IKBIPQ70UQ0 350 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM124AQ86V42 546 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 MICU2Q8IYU8 434 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 PACRGLQ8N7B6 248 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF740Q8NDX6 193 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 EME1Q96AY2 570 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 SH3KBP1Q96B97 665 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 CENPNQ96H22 339 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 REXO5Q96IC2 774 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 BMFQ96LC9 184 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 DUSP26Q9BV47 211 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 Q9H521 79 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 EXO1Q9UQ84 846 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 LAMA3Q16787 3333 aa13.75□□□□□ -0.21
RTFDC1-201ENST00000023939 DOCK9Q9BZ29 2069 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 KDM1AO60341 852 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 TGFB1P01137 390 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 RETP07949 1114 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 LAMP1P11279 417 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 SRFP11831 508 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 IL1RNP18510 177 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 CDKN2CP42773 168 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 MED21Q13503 144 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 RPE65Q16518 533 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 INTS11Q5TA45 600 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 GPR155Q7Z3F1 870 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 R3HCC1LQ7Z5L2 792 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 ANKRD46Q86W74 232 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 VPS37AQ8NEZ2 397 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 GFM2Q969S9 779 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 PPWD1Q96BP3 646 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 BHLHE41Q9C0J9 482 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms