RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Nme6O88425 189 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mamld1P0C6A2 803 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 TekQ02858 1122 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Doc2aQ7TNF0 405 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q8R2K8 148 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Srp54bE9PXC0 504 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dbx2F8VQH7 377 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vmn2r52L7N2B2 852 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mmp10O55123 476 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc16a3P57787 470 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q3TTL0 348 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Acsm3Q3UNX5 580 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 EfsQ64355 560 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Clec1aQ8BWY2 269 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 CipcQ8R0W1 432 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnajc19Q9CQV7 116 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 BvesQ9ES83 358 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cd63P41731 238 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Acss3Q14DH7 682 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 CilpQ66K08 1184 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr735Q7TRM4 354 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnajb13Q80Y75 316 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfp708F8VPP0 541 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bmp6P20722 510 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Asgr1P34927 284 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Kcna7Q17ST2 489 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 CblcQ80XL1 496 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mab21l2Q8BPP1 359 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Agbl2Q8CDK2 862 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc29a4Q8R139 528 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lpin1Q91ZP3 924 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pik3c2bE9QAN8 1632 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 DxoO70348 397 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gng2P63213 71 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nrp1P97333 923 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 MedagQ14BA6 303 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 BpiQ67E05 483 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm5416Q6IE28 97 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dnajc16Q80TN4 772 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Kirrel1Q80W68 789 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tusc3Q8BTV1 347 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rhbdl1Q8VC82 373 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ska1Q9CPV1 254 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fcf1Q9CTH6 198 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sp2Q9D2H6 612 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dnajb2Q9QYI5 324 aa11.65□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp992B1ASD8 573 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 1700064H15RikD3Z4D4 81 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r59E9PUT5 865 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm8159E9Q0R1 267 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Msl3l2G3X992 371 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 LynP25911 512 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Hoxa11P31311 313 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 CebpgP53568 150 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Kctd9Q80UN1 339 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 MkxQ8BIA3 353 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Calhm4Q8CE93 315 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Syn3Q8JZP2 579 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp991Q8R1N3 573 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gatad2bQ8VHR5 594 aaKnown RBP11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ppa2Q91VM9 330 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adgrl4Q923X1 739 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ccdc167Q9D162 97 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 UxtQ9WTZ0 157 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cfap44E9Q5M6 1843 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ighg3A0A1Y7VJN6 399 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tubg1P83887 451 aaKnown RBP11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tigd2Q0VBL1 525 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tmem63bQ3TWI9 832 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Phf21bQ8C966 487 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Acad8Q9D7B6 413 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ccdc54Q9DAL3 329 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fank1Q9DAM9 344 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 AlplP09242 524 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rpl26P61255 145 aaKnown RBP11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cdk18Q04899 451 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eml4Q3UMY5 988 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Coq8bQ566J8 533 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q6P1I3 445 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pofut2Q8VHI3 429 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm14459A2BI73 179 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 HckP08103 524 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lurap1lQ8K2P1 221 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr63Q8VBW9 316 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Smurf1Q9CUN6 731 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sec23bQ9D662 767 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gbe1Q9D6Y9 702 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adh6aE9Q5Z6 375 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fitm2P59266 262 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tmem45aQ60774 273 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Piwil2Q8CDG1 971 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q8WUR0 141 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tmem246Q91YV9 403 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dyrk3Q922Y0 586 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 RTRAFQ9CQE8 244 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Abhd5Q9DBL9 351 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Natd1Q9DBW3 110 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 PtnP63089 168 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adam5Q3TTE0 751 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 GstcdQ5RL51 634 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms