RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SLC10A3P09131 477 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 HIST1H2AGP0C0S8 130 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 HIST1H2ADP20671 130 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 PRPS1L1P21108 318 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 CD70P32970 193 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 FAHD1Q6P587 224 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 ITPKCQ96DU7 683 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 ASIC4Q96FT7 647 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 HIST1H2AHQ96KK5 128 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 HIST1H2AJQ99878 128 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 HEPHQ9BQS7 1158 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 H2AFJQ9BTM1 129 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 RPS6KA6Q9UK32 745 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 A0A1W2PQ45 241 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 A0A1W2PQY0 241 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 E9PQ18 207 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ABLIM3O94929 683 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 EFEMP2O95967 443 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 COX7A2P14406 83 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 MAPK1P28482 360 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PFN3P60673 137 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 LMAN2Q12907 356 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 DDX39BQ13838 428 aaKnown RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PROX2Q3B8N5 592 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 Q6ZNB5 142 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PLEKHG7Q6ZR37 379 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 FAM124AQ86V42 546 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SLC22A16Q86VW1 577 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SH3KBP1Q96B97 665 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 REEP1Q9H902 201 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 TPT1P8Q9HAU6 139 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ZBTB20Q9HC78 741 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 OSGIN1Q9UJX0 560 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 NPIPB8E9PQR5 432 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 M0R082 166 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SOCS5O75159 536 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 CASP9P55211 416 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 KCNJ10P78508 379 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 RHOXF1Q8NHV9 184 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PROX1Q92786 737 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 POP5Q969H6 163 aaKnown RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PSD2Q9BQI7 771 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 TMEM175Q9BSA9 504 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 DSN1Q9H410 356 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 GIN1Q9NXP7 522 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 FAM8A1Q9UBU6 413 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 RNF6Q9Y252 685 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 EFCAB9A8MZ26 197 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 NDUFB5O43674 189 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 GCM2O75603 506 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ETHE1O95571 254 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SERPINB10P48595 397 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ITGA1P56199 1179 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SLC13A2Q13183 592 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 TPRG1Q6ZUI0 275 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 FAM9CQ8IZT9 166 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SVOPQ8N4V2 548 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 OR2AP1Q8NGE2 309 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 HPS1Q92902 700 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 ZHX1-C8orf76Q96EF9 292 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 LYSMD1Q96S90 227 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 PITX2Q99697 317 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 SCHIP1Q9P0W5 487 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-233ENST00000642021 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
PHGDH-233ENST00000642021 GFYI3L273 518 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 NUAK1O60285 661 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 NTRK1P04629 796 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 JUPP14923 745 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 SERPINA4P29622 427 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 SLC19A1P41440 591 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
PHGDH-233ENST00000642021 SRSF11Q05519 484 aaKnown RBP13.36□□□□□ -0.27
PHGDH-233ENST00000642021 SOWAHCQ53LP3 525 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-233ENST00000642021 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 FCRL1Q96LA6 429 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 C19orf43Q9BQ61 176 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 FZD4Q9ULV1 537 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 IGLV3-16A0A075B6K0 115 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 IGSF6O95976 241 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms