RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 HLA-DQB2P05538 268 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 SNRPB2P08579 225 aaKnown RBP5.52□□□□□ -1.53
RTTN-218ENST00000640408 UMPSP11172 480 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 FCARP24071 287 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 CD27P26842 260 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 NSG1P42857 185 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 SLC15A1P46059 708 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 STT3AP46977 705 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 ATP6V0D1P61421 351 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 RACK1P63244 317 aaKnown RBP5.52□□□□□ -1.53
RTTN-218ENST00000640408 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 KCNJ8Q15842 424 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 FAM76BQ5HYJ3 339 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 TCEAL6Q6IPX3 200 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 TRNP1Q6NT89 227 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 NPNTQ6UXI9 565 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 KDELC2Q7Z4H8 507 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 SNX20Q7Z614 316 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 WDR48Q8TAF3 677 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 CENPNQ96H22 339 aaPredicted RBP5.52□□□□□ -1.53
RTTN-218ENST00000640408 SERAC1Q96JX3 654 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 FRMD6Q96NE9 622 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 GAL3ST1Q99999 423 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 GPR174Q9BXC1 333 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 NMUR2Q9GZQ4 415 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 SALL4Q9UJQ4 1053 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 POFUT2Q9Y2G5 429 aa5.52□□□□□ -1.53
RTTN-218ENST00000640408 PPM1BO75688 479 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 RECQL5O94762 991 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 PEPDP12955 493 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 MATN1P21941 496 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TEAD1P28347 426 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 HMGCLP35914 325 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 GSTM5P46439 218 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 SLC18A2Q05940 514 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 BST1Q10588 318 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 COTL1Q14019 142 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 GALEQ14376 348 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 POU6F1Q14863 301 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 INSCQ1MX18 579 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 GALNTL6Q49A17 601 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TXNRD3NBQ6F5E7 133 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 FSTL4Q6MZW2 842 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 ESRP1Q6NXG1 681 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 PTAR1Q7Z6K3 402 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 GKN2Q86XP6 184 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CACUL1Q86Y37 369 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CLIP4Q8N3C7 705 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 HAVCR1Q96D42 359 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 EBNA1BP2Q99848 306 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 ITM2CQ9NQX7 267 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 GRHL1Q9NZI5 618 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 SLC39A10Q9ULF5 831 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 SLC6A14Q9UN76 642 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CYP8B1Q9UNU6 501 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 POLR3HQ9Y535 204 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 PCDHGB3Q9Y5G1 929 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 DNMT3AQ9Y6K1 912 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 G3V2T6 193 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 MID1O15344 667 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 ZNF682O95780 498 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 EGFP01133 1207 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TNFP01375 233 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 ESR1P03372 595 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 HMGN1P05114 100 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CD2P06729 351 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CHRM3P20309 590 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 PTGER3P43115 390 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 STK19P49842 368 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 KLF1Q13351 362 aaPredicted RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 IL18Q14116 193 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 ELOCQ15369 112 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 WSCD2Q2TBF2 565 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TPRG1LQ5T0D9 272 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 DPPA4Q7L190 304 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 ADIPOR2Q86V24 386 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TRAPPC5Q8IUR0 188 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 NKAPQ8N5F7 415 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 IL17RCQ8NAC3 791 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 UTP15Q8TED0 518 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 EEF1AKMT1Q8WVE0 214 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 PMEPA1Q969W9 287 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CREB3L1Q96BA8 519 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 DIRAS2Q96HU8 199 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 CIB1Q99828 191 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 RBM4BQ9BQ04 359 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 RBM4Q9BWF3 364 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 FOXQ1Q9C009 403 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 COQ10BQ9H8M1 238 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 MRM3Q9HC36 420 aaKnown RBP5.51□□□□□ -1.53
RTTN-218ENST00000640408 UBP1Q9NZI7 540 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 IKZF3Q9UKT9 509 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 EFCAB9A8MZ26 197 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 TNFRSF10CO14798 259 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 RBP1P09455 135 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 SLC35G4P0C7Q5 338 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 STOMP27105 288 aa5.51□□□□□ -1.53
RTTN-218ENST00000640408 MAPK1P28482 360 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms