RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 PRR35P0CG20 571 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 BMP4P12644 408 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 ETFAP13804 333 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SERPINB1P30740 379 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 KRT20P35900 424 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 ETV3P41162 512 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SERPINB10P48595 397 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 RNF144AP50876 292 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 CRISP3P54108 245 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 IFITM3Q01628 133 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 PCBP2Q15366 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 DPY19L3Q6ZPD9 716 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SNX20Q7Z614 316 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 DDX53Q86TM3 631 aaKnown RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 GATAD2AQ86YP4 633 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 GRAMD2AQ8IUY3 354 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SCML4Q8N228 414 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 STK40Q8N2I9 435 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 NXPE1Q8N323 547 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 STX19Q8N4C7 294 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 OR5K1Q8NHB7 308 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SH3YL1Q96HL8 342 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 LINC00597Q9H2U6 94 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 KAT8Q9H7Z6 458 aaKnown RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 SGK2Q9HBY8 427 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 ZNF334Q9HCZ1 680 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 HMG20AQ9NP66 347 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 GIMAP4Q9NUV9 329 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 RLIMQ9NVW2 624 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 B4GALT6Q9UBX8 382 aa7.47□□□□□ -1.21
NECAP1-221ENST00000639955 PTBP2Q9UKA9 531 aaKnown RBP7.47□□□□□ -1.21
NECAP1-221ENST00000639955 CHD7Q9P2D1 2997 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 CACNA1IQ9P0X4 2223 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 MAGEB17A8MXT2 336 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 SLC28A1O00337 649 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 RTCAO00442 366 aaKnown RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 KPNA3O00505 521 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ANKRD28O15084 1053 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 INPPL1O15357 1258 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 CBFA2T3O75081 653 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 STSP08842 583 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ANXA4P09525 319 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 LHCGRP22888 699 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 SERPINA4P29622 427 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 IFNA8P32881 189 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 NR4A2P43354 598 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 RECQLP46063 649 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 CLK3P49761 638 aaKnown RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 NKX3-2P78367 333 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 PPP2R2BQ00005 443 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 SMARCB1Q12824 385 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ARHGEF6Q15052 776 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 FAM214AQ32MH5 1076 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 GPRC6AQ5T6X5 926 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 NOXRED1Q6NXP6 359 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ADCK2Q7Z695 626 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 OR8H2Q8N162 312 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 TMEM203Q969S6 136 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 DMRTB1Q96MA1 342 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ZNF641Q96N77 438 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-221ENST00000639955 IL17FQ96PD4 163 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 PKP4Q99569 1192 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 COPS4Q9BT78 406 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 ATP13A3Q9H7F0 1226 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 HEBP1Q9NRV9 189 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 TMEM161AQ9NX61 479 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 GIN1Q9NXP7 522 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 FZD4Q9ULV1 537 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.21
NECAP1-221ENST00000639955 VWA8A3KMH1 1905 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 A0A1W2PQ45 241 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 A0A1W2PQY0 241 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 EFCAB9A8MZ26 197 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 PCDH7O60245 1069 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 IGSF6O95976 241 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 CKMT1AP12532 417 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 EPORP19235 508 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 ACRV1P26436 265 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 TTKP33981 857 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 CSNK1DP48730 415 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 TGM4P49221 684 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 ISL1P61371 349 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 RPP38P78345 283 aaKnown RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 CLCA4Q14CN2 919 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 SF3B4Q15427 424 aaKnown RBP eCLIP7.46□□□□□ -1.224e-7■■■■■ 38
NECAP1-221ENST00000639955 CCDC85BQ15834 202 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 ZXDCQ2QGD7 858 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 SMU1Q2TAY7 513 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 PRSS36Q5K4E3 855 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 LAIR2Q6ISS4 152 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 TNFAIP8L2Q6P589 184 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 TRAPPC5Q8IUR0 188 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 FAM83FQ8NEG4 500 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-221ENST00000639955 FAR1Q8WVX9 515 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 PIH1D2Q8WWB5 315 aa7.46□□□□□ -1.22
NECAP1-221ENST00000639955 ING5Q8WYH8 240 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms