RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ADCK2Q7Z695 626 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 PLD3Q8IV08 490 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 ZC3H7AQ8IWR0 971 aaKnown RBP17.52■□□□□ 0.4
CLN6-220ENST00000637450 LMNTD2Q8IXW0 634 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 BCORP1Q8N888 145 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 CD200R1Q8TD46 325 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 GPR21Q99679 349 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 ZNF700Q9H0M5 742 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 ABCF3Q9NUQ8 709 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 RIC8BQ9NVN3 520 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 PLA2G3Q9NZ20 509 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 MRPS2Q9Y399 296 aaKnown RBP17.52■□□□□ 0.4
CLN6-220ENST00000637450 NEU2Q9Y3R4 380 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 COMMD10Q9Y6G5 202 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 H7BY64 318 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 WFS1O76024 890 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 IMPA1P29218 277 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 COILP38432 576 aaPredicted RBP17.51■□□□□ 0.39
CLN6-220ENST00000637450 MAGEA3P43357 314 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 SNRPNP63162 240 aaKnown RBP17.51■□□□□ 0.39
CLN6-220ENST00000637450 CACNA1DQ01668 2161 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 PCOLCEQ15113 449 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 NDUFA9Q16795 377 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 THEMIS2Q5TEJ8 643 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 ZNF324BQ6AW86 544 aaPredicted RBP17.51■□□□□ 0.39
CLN6-220ENST00000637450 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
CLN6-220ENST00000637450 SIRT6Q8N6T7 355 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 MS4A14Q96JA4 679 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 SIGLEC10Q96LC7 697 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 PRAP1Q96NZ9 151 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
CLN6-220ENST00000637450 OLAHQ9NV23 265 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 TMEM184CQ9NVA4 438 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 MKL2Q9ULH7 1088 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 CREBBPQ92793 2442 aa17.51■□□□□ 0.39
CLN6-220ENST00000637450 KCNE1BA0A087WTH5 132 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 TRAV17A0A0B4J275 112 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 EIF3FO00303 357 aaPredicted RBP17.5■□□□□ 0.39
CLN6-220ENST00000637450 HAUS5O94927 633 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 CELA2AP08217 269 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 ICAM2P13598 275 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 HRH2P25021 359 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 AVPR1BP47901 424 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 EFNA3P52797 238 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 MAT1AQ00266 395 aaKnown RBP17.5■□□□□ 0.39
CLN6-220ENST00000637450 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 UBE2R2Q712K3 238 aaPredicted RBP17.5■□□□□ 0.39
CLN6-220ENST00000637450 PIWIL4Q7Z3Z4 852 aaKnown RBP17.5■□□□□ 0.39
CLN6-220ENST00000637450 CPNE9Q8IYJ1 553 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 CALML6Q8TD86 181 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 PBKQ96KB5 322 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 IMMP1LQ96LU5 166 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 TAAR6Q96RI8 345 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 PPP2R2CQ9Y2T4 447 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 MAD1L1Q9Y6D9 718 aa17.5■□□□□ 0.39
CLN6-220ENST00000637450 H0YIG0 161 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 JRKO75564 520 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 STSP08842 583 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 ITGAMP11215 1152 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 PER3P56645 1201 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 AP2B1P63010 937 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 CCZ1BP86790 482 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
CLN6-220ENST00000637450 INAQ16352 499 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 CCDC137Q6PK04 289 aaKnown RBP17.49■□□□□ 0.39
CLN6-220ENST00000637450 VN1R4Q7Z5H5 301 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 AMER2Q8N7J2 671 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 NAT8LQ8N9F0 302 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 OR9A4Q8NGU2 314 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 MAGEB10Q96LZ2 347 aaPredicted RBP17.49■□□□□ 0.39
CLN6-220ENST00000637450 AARSD1Q9BTE6 412 aaKnown RBP17.49■□□□□ 0.39
CLN6-220ENST00000637450 TUBB6Q9BUF5 446 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 JRKLQ9Y4A0 524 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 SVILO95425 2214 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 HEATR5BQ9P2D3 2071 aa17.49■□□□□ 0.39
CLN6-220ENST00000637450 DIDO1Q9BTC0 2240 aaKnown RBP17.48■□□□□ 0.39
CLN6-220ENST00000637450 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
CLN6-220ENST00000637450 WDPCPO95876 746 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 STATHP02808 62 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 C8orf89P0DMQ9 161 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 RPS15AP62244 130 aaKnown RBP17.48■□□□□ 0.39
CLN6-220ENST00000637450 MPP1Q00013 466 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 TIAL1Q01085 375 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLN6-220ENST00000637450 ZRSR2Q15696 482 aaKnown RBP17.48■□□□□ 0.39
CLN6-220ENST00000637450 HSP90AA5PQ58FG0 334 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 MCOLN3Q8TDD5 553 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 THAP11Q96EK4 314 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 CCDC138Q96M89 665 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 CYTH2Q99418 400 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 VN1R1Q9GZP7 353 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 RNF32Q9H0A6 362 aa17.48■□□□□ 0.39
CLN6-220ENST00000637450 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■□□ 15
CLN6-220ENST00000637450 CCDC177Q9NQR7 707 aaPredicted RBP17.48■□□□□ 0.39
CLN6-220ENST00000637450 A0A1B0GUH1 482 aa17.47■□□□□ 0.39
CLN6-220ENST00000637450 F10P00742 488 aa17.47■□□□□ 0.39
CLN6-220ENST00000637450 CYC1P08574 325 aa17.47■□□□□ 0.39
CLN6-220ENST00000637450 TDGF1P3P51864 188 aa17.47■□□□□ 0.39
CLN6-220ENST00000637450 TBPL1P62380 186 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms