RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TEX37Q96LM6 180 aa20.24■□□□□ 0.83
CLN8-213ENST00000637156 RHBGQ9H310 441 aa20.24■□□□□ 0.83
CLN8-213ENST00000637156 MRGBPQ9NV56 204 aa20.24■□□□□ 0.83
CLN8-213ENST00000637156 TBX6O95947 436 aaPredicted RBP20.23■□□□□ 0.83
CLN8-213ENST00000637156 TGFB1P01137 390 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 PIK3CBP42338 1070 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 ACADVLP49748 655 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 REEP5Q00765 189 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 GRIK2Q13002 908 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 RPS6KA2Q15349 733 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 HLA-BQ31612 363 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 AGKQ53H12 422 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 C10orf62Q5T681 223 aaPredicted RBP20.23■□□□□ 0.83
CLN8-213ENST00000637156 ASRGL1Q7L266 308 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 ZNF438Q7Z4V0 828 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 MIER2Q8N344 545 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 FBXO27Q8NI29 283 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 RP9Q8TA86 221 aaKnown RBP20.23■□□□□ 0.83
CLN8-213ENST00000637156 C11orf24Q96F05 449 aaPredicted RBP20.23■□□□□ 0.83
CLN8-213ENST00000637156 NT5DC2Q9H857 520 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 C11orf16Q9NQ32 467 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 ACTR10Q9NZ32 417 aa20.23■□□□□ 0.83
CLN8-213ENST00000637156 NOP53Q9NZM5 478 aaKnown RBP20.23■□□□□ 0.83
CLN8-213ENST00000637156 FAM221BA6H8Z2 402 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 FAM86C2PA6NEL3 165 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 PATE3B3GLJ2 98 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 THRAP10827 490 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 AMD1P17707 334 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 PRDX6P30041 224 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 CMPK1P30085 196 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 GRIA3P42263 894 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 MRPL19P49406 292 aaKnown RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 CORO7P57737 925 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 STX1BP61266 288 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 DUOXA1Q1HG43 343 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 ZNF425Q6IV72 752 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 RINLQ6ZS11 566 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 ADCK2Q7Z695 626 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLN8-213ENST00000637156 PITHD1Q9GZP4 211 aaPredicted RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 DMRT3Q9NQL9 472 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 TAS2R1Q9NYW7 299 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 CABIN1Q9Y6J0 2220 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 GSAPA4D1B5 854 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 B2RBV5 119 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 OR1F1O43749 312 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 HOXB3P14651 431 aaPredicted RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 UGT2B7P16662 529 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 UFM1P61960 85 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 TBL3Q12788 808 aaKnown RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 CYLC2Q14093 348 aaPredicted RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 LPAL2Q16609 132 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 PRR23BQ6ZRT6 265 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 GK5Q6ZS86 529 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 SNX32Q86XE0 403 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 PROKR1Q8TCW9 393 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 MRPL1Q9BYD6 325 aaKnown RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 OR51B5Q9H339 312 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 ACTL8Q9H568 366 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 BAIAP2L1Q9UHR4 511 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 EIF3LQ9Y262 564 aaKnown RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 POLR3HQ9Y535 204 aaPredicted RBP20.22■□□□□ 0.83
CLN8-213ENST00000637156 PCDHGA2Q9Y5H1 932 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 ENTPD2Q9Y5L3 495 aa20.22■□□□□ 0.83
CLN8-213ENST00000637156 TNRC6BQ9UPQ9 1833 aaKnown RBP20.21■□□□□ 0.83
CLN8-213ENST00000637156 SPEGQ15772 3267 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 A0A1B0GTQ1 180 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 ANKRD28O15084 1053 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 CFIP05156 583 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 TYRP1P17643 537 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 HOXD12P35452 270 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 IRX1P78414 480 aaPredicted RBP20.21■□□□□ 0.83
CLN8-213ENST00000637156 MAD2L1Q13257 205 aaPredicted RBP20.21■□□□□ 0.83
CLN8-213ENST00000637156 C6orf132Q5T0Z8 1188 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 CYP20A1Q6UW02 462 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 AVL9Q8NBF6 648 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 CHTF18Q8WVB6 975 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 APOLD1Q96LR9 279 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 PPM1MQ96MI6 270 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 ACTR5Q9H9F9 607 aaPredicted RBP20.21■□□□□ 0.83
CLN8-213ENST00000637156 UCK1Q9HA47 277 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 IL21RQ9HBE5 538 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 CAPN10Q9HC96 672 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 SNX7Q9UNH6 387 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 DLGAP4Q9Y2H0 992 aa20.21■□□□□ 0.83
CLN8-213ENST00000637156 OR5K3A6NET4 321 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 ANKDD1BA6NHY2 528 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 C2orf74A8MZ97 194 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 CCNDBP1O95273 360 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 BCKDHAP12694 445 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 HRH2P25021 359 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 PTPN4P29074 926 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 ZFP36L2P47974 494 aaKnown RBP20.2■□□□□ 0.82
CLN8-213ENST00000637156 LSSP48449 732 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 PPP1CAP62136 330 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 PTGR1Q14914 329 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 C14orf28Q4W4Y0 310 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 PDCD4Q53EL6 469 aaKnown RBP20.2■□□□□ 0.82
CLN8-213ENST00000637156 TRIM73Q86UV7 250 aa20.2■□□□□ 0.82
CLN8-213ENST00000637156 NUDT8Q8WV74 236 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms