RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-215	ENST00000625617	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.72	□□□□□ -0.21
TUBB3-215	ENST00000625617	DOCK10	Q96BY6	2186 aa		13.72	□□□□□ -0.21
TUBB3-215	ENST00000625617		E7ENX8	843 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	HAT1	O14929	419 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	PRAMEF2	O60811	474 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	SYF2	O95926	243 aa	Known RBP	13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	MST1	P26927	711 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	CA7	P43166	264 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	AVPR1B	P47901	424 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	TAP2	Q03519	686 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	RBPJ	Q06330	500 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	THEMIS2	Q5TEJ8	643 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	MFSD4B	Q5TF39	518 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	CRYBG3	Q68DQ2	2970 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	ZNF470	Q6ECI4	717 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	MTFR2	Q6P444	385 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	CASC4	Q6P4E1	433 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	RPTN	Q6XPR3	784 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	CILP2	Q8IUL8	1156 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	PLD3	Q8IV08	490 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	DNAJB8	Q8NHS0	232 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	MAIP1	Q8WWC4	291 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	EBNA1BP2	Q99848	306 aa	Known RBP	13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	VN1R1	Q9GZP7	353 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	INTS10	Q9NVR2	710 aa	Known RBP	13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	SH3BGRL2	Q9UJC5	107 aa		13.71	□□□□□ -0.21
TUBB3-215	ENST00000625617	CCL21	O00585	134 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	SEC24D	O94855	1032 aa	Predicted RBP	13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	CYC1	P08574	325 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	GRN	P28799	593 aa	Known RBP	13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	CLCN7	P51798	805 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	EFNA3	P52797	238 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	CUL1	Q13616	776 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	MINDY4	Q4G0A6	757 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	MEI1	Q5TIA1	1274 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	ARMC3	Q5W041	872 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	NEPRO	Q6NW34	567 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	CENPU	Q71F23	418 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	MRGPRG	Q86SM5	289 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	OR9A4	Q8NGU2	314 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	GIMAP7	Q8NHV1	300 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	IMMP1L	Q96LU5	166 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	PHF12	Q96QT6	1004 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	SLC30A3	Q99726	388 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	CCDC68	Q9H2F9	335 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	SAMD15	Q9P1V8	674 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	SVIL	O95425	2214 aa		13.7	□□□□□ -0.22
TUBB3-215	ENST00000625617	MDC1	Q14676	2089 aa	Known RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	TCRBV7S3A2	A0A539	114 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	CTAGE9	A4FU28	777 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617		H0YIG0	161 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	NSA2	O95478	260 aa	Known RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	FGG	P02679	453 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	STATH	P02808	62 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	ENO3	P13929	434 aa	Predicted RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	PTGER4	P35408	488 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	KCNJ1	P48048	391 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	VPS41	P49754	854 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	TERF1	P54274	439 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	CASP6	P55212	293 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	SARNP	P82979	210 aa	Known RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	PMP22	Q01453	160 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	BTBD16	Q32M84	506 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	ZNF766	Q5HY98	468 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	PLAG1	Q6DJT9	500 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	LANCL3	Q6ZV70	420 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	GDF7	Q7Z4P5	450 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	PRELID2	Q8N945	189 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	SPC24	Q8NBT2	197 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	KCNJ9	Q92806	393 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	ZNF669	Q96BR6	464 aa	Predicted RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	STMN3	Q9NZ72	180 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	KLHL42	Q9P2K6	505 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	LRBA	P50851	2863 aa		13.69	□□□□□ -0.22
TUBB3-215	ENST00000625617	IGHV3-20	A0A0C4DH32	117 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617		A8MUI8	341 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617		H7BY64	318 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	SLC19A2	O60779	497 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	AVIL	O75366	819 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	F7	P08709	466 aa	Predicted RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	MPC1L	P0DKB6	136 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	IL1RN	P18510	177 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	HTR1E	P28566	365 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	IMPA1	P29218	277 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	CDC25B	P30305	580 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	SKIV2L2	P42285	1042 aa	Known RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	XCR1	P46094	333 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	RPS15A	P62244	130 aa	Known RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	TBPL1	P62380	186 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	SNRPN	P63162	240 aa	Known RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	SRSF11	Q05519	484 aa	Known RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	THOC5	Q13769	683 aa	Known RBP	13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	PTK6	Q13882	451 aa		13.68	□□□□□ -0.22
TUBB3-215	ENST00000625617	DHX34	Q14147	1143 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms