RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZSWIM9Q86XI8 627 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 METTL4Q8N3J2 472 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 STX19Q8N4C7 294 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 SLC5A8Q8N695 610 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 GTPBP3Q969Y2 492 aaKnown RBP15.26■□□□□ 0.03
NPHP4-211ENST00000622020 TPT1P8Q9HAU6 139 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 SH3BP4Q9P0V3 963 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 RHCGQ9UBD6 479 aa15.26■□□□□ 0.03
NPHP4-211ENST00000622020 NINQ8N4C6 2090 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 J3KTA2 159 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CTDSP2O14595 271 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CD9P21926 228 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 POU1F1P28069 291 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 SLC11A1P49279 550 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CDH12P55289 794 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 RSBN1Q5VWQ0 802 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 SERPINA13PQ6UXR4 307 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 TPGS1Q6ZTW0 290 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 FAM217AQ8IXS0 508 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 ZNF675Q8TD23 568 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 GGHQ92820 318 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 P2RY13Q9BPV8 354 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 NIPSNAP1Q9BPW8 284 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CDADC1Q9BWV3 514 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 TP63Q9H3D4 680 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 TPK1Q9H3S4 243 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 ITGB1BP2Q9UKP3 347 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 METTL15A6NJ78 407 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 RGS5O15539 181 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HIST1H2AGP0C0S8 130 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 ZDHHC11BP0C7U3 371 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CKBP12277 381 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HIST1H2ADP20671 130 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CRATP43155 626 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CCL23P55773 120 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 DMPKQ09013 629 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HKDC1Q2TB90 917 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 ATP13A5Q4VNC0 1218 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 ARMCX4Q5H9R4 360 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 DEPDC1Q5TB30 811 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 OR9Q2Q8NGE9 314 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 OR52E4Q8NGH9 312 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HIST1H2AHQ96KK5 128 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 HIST1H2AJQ99878 128 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 H2AFJQ9BTM1 129 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 RPS6KA6Q9UK32 745 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 TRPM7Q96QT4 1865 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 PABPN1LA6NDY0 278 aaKnown RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 NPIPB15A6NHN6 443 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 AP3D1O14617 1153 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 SYN3O14994 580 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 PCDH7O60245 1069 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 FZD6O60353 706 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CHRM5P08912 532 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 AMD1P17707 334 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CRYBA2P53672 197 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 GANABQ14697 944 aaKnown RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 NAGSQ8N159 534 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 MINDY2Q8NBR6 621 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 MED8Q96G25 268 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 NDEL1Q9GZM8 345 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 EXOSC4Q9NPD3 245 aaKnown RBP15.25■□□□□ 0.03
NPHP4-211ENST00000622020 CLEC4EQ9ULY5 219 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 MAN2B2Q9Y2E5 1009 aa15.25■□□□□ 0.03
NPHP4-211ENST00000622020 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 TNFRSF11BO00300 401 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 SUV39H1O43463 412 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 ELNP15502 786 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 AZGP1P25311 298 aaKnown RBP15.24■□□□□ 0.03
NPHP4-211ENST00000622020 CXCR4P61073 352 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
NPHP4-211ENST00000622020 ST3GAL4Q11206 333 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 UAP1L1Q3KQV9 507 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 UBE2UQ5VVX9 321 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 FRG2Q64ET8 278 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 TCAIMQ8N3R3 496 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 OR4K1Q8NGD4 311 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 DMRTB1Q96MA1 342 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 FRG2BQ96QU4 278 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 OR5M11Q96RB7 305 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 CCNB1IP1Q9NPC3 277 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 NOX1Q9Y5S8 564 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 PLXNA4Q9HCM2 1894 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 OR6C75A6NL08 312 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 MFN2O95140 757 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 TRBC1P01850 177 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 C9P02748 559 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 PRPS2P11908 318 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 INO80DQ53TQ3 878 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-211ENST00000622020 ZNF852Q6ZMS4 543 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 GDPD3Q7L5L3 318 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 SERPINA11Q86U17 422 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 OR8H2Q8N162 312 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 NXPE1Q8N323 547 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 DDX28Q9NUL7 540 aaKnown RBP15.24■□□□□ 0.03
NPHP4-211ENST00000622020 MARCH5Q9NX47 278 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms