RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PCDHAC1Q9H158 963 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ZBP1Q9H171 429 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 NEK6Q9HC98 313 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 Q9N2J8 555 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 EME2A4GXA9 379 aaPredicted RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 KHNYNO15037 678 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 TRAPPC6AO75865 159 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 FABP3P05413 133 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 HNRNPCP07910 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
GGA3-223ENST00000621870 IGFBP6P24592 240 aaPredicted RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 KHKP50053 298 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 GSCP56915 257 aaPredicted RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 TRIM25Q14258 630 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 NNATQ16517 81 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 DEFB110Q30KQ9 67 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 IFI44LQ53G44 452 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 C9orf50Q5SZB4 431 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 DDI2Q5TDH0 399 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ANKRD26P1Q6NSI1 321 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ABRAXAS1Q6UWZ7 409 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 CCDC103Q8IW40 242 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ZCCHC7Q8N3Z6 543 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 ARFGAP1Q8N6T3 406 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 POP5Q969H6 163 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 CPEB1Q9BZB8 566 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 OR51V1Q9H2C8 321 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 MRM3Q9HC36 420 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 RPRD1BQ9NQG5 326 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 KLRF1Q9NZS2 232 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 UTRNP46939 3433 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 NBASA2RRP1 2371 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 EFCAB10A6NFE3 127 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 H0YGN5 161 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 M0QX08 132 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 GPR39O43194 453 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PLGP00747 810 aaPredicted RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 KLKB1P03952 638 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PGRP06401 933 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 FHP07954 510 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 C1GALT1C1LP0DN25 315 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 JUPP14923 745 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ENGP17813 658 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 CD68P34810 354 aaPredicted RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 RGRP47804 291 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SUOXP51687 545 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 UFM1P61960 85 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 TBPL1P62380 186 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 TDGQ13569 410 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 TRIM16LQ309B1 348 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 KIAA1161Q6NSJ0 714 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ALKAL1Q6UXT8 129 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 Q6ZSR6 202 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 CCDC116Q8IYX3 515 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ZDHHC14Q8IZN3 488 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ARL10Q8N8L6 244 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 CGREF1Q99674 301 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ARHGEF3Q9NR81 526 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 GIN1Q9NXP7 522 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ABLIM1O14639 778 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 AURKAO14965 403 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ADAMDEC1O15204 470 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PCDHGA12O60330 932 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SERPINA1P01009 418 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ALPPP05187 535 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SYPP08247 313 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 IL1RNP18510 177 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 IGFBP5P24593 272 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 DIO3P55073 304 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SLC18A2Q05940 514 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MBTPS1Q14703 1052 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MAPK11Q15759 364 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SLC44A4Q53GD3 710 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 NEK5Q6P3R8 708 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 CEACAM20Q6UY09 585 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 FAM92BQ6ZTR7 304 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 TTLL10Q6ZVT0 673 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 NUP54Q7Z3B4 507 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 GALNT10Q86SR1 603 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 JAZF1Q86VZ6 243 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MFSD6LQ8IWD5 586 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 KBTBD2Q8IY47 623 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 GHDCQ8N2G8 530 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 CPXM2Q8N436 756 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 C19orf18Q8NEA5 215 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 OR4K17Q8NGC6 315 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ZHX1-C8orf76Q96EF9 292 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SH3YL1Q96HL8 342 aaPredicted RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 KCNS3Q9BQ31 491 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 NFS1Q9Y697 457 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 AP4B1Q9Y6B7 739 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 USP54Q70EL1 1684 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 RFPL1O75677 317 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SLC16A8O95907 504 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ATP5A1P25705 553 aaKnown RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 CCT3P49368 545 aaKnown RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 CSTF1Q05048 431 aaKnown RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 SP140Q13342 867 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MOGSQ13724 837 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PTGR1Q14914 329 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms