RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF655Q8N720 491 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 NLGN4YQ8NFZ3 816 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 HNRNPLLQ8WVV9 542 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 ZIM3Q96PE6 472 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 MGAQ8IWI9 3026 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 KCNE1BA0A087WTH5 132 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 E2F3O00716 465 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 TERTO14746 1132 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 CCNT2O60583 730 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 KRT4P19013 534 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 CD22P20273 847 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 ITPKBP27987 946 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 BCL6P41182 706 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SLC18A2Q05940 514 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 E2F2Q14209 437 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 PCBP2Q15366 365 aaKnown RBP eCLIP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 HKDC1Q2TB90 917 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 PRTGQ2VWP7 1150 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 WASHC2DQ5SRD0 308 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 RHBDD2Q6NTF9 364 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 LRRC70Q7Z2Q7 622 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 GPR135Q8IZ08 494 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 C4orf33Q8N1A6 199 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SCYL1Q96KG9 808 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 ACTR5Q9H9F9 607 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 DNAJC11Q9NVH1 559 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 GPRC5BQ9NZH0 403 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 DHCR7Q9UBM7 475 aaKnown RBP13.68□□□□□ -0.22
CBWD3-217ENST00000621474 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
CBWD3-217ENST00000621474 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 LOC101059948A0A1B0GTJ6 334 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 EFSO43281 561 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 S100BP04271 92 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 GSTA1P08263 222 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 GFAPP14136 432 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 GNAZP19086 355 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 ITGAXP20702 1163 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 CCR8P51685 355 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 REEP5Q00765 189 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 TLE3Q04726 772 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 PDK4Q16654 411 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 ST3GAL2Q16842 350 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 TCTE1Q5JU00 501 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 TLDC1Q6P9B6 456 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 FAM199XQ6PEV8 388 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 C6orf15Q6UXA7 325 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 CACNA2D3Q8IZS8 1091 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 DSELQ8IZU8 1212 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 ANKRD53Q8N9V6 530 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 ZBTB9Q96C00 473 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 TM4SF19Q96DZ7 209 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 PHF21BQ96EK2 531 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 C10orf90Q96M02 699 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 DPH1Q9BZG8 443 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 PELI2Q9HAT8 420 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 LHX9Q9NQ69 397 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 GEMIN8Q9NWZ8 242 aaKnown RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 COPG2Q9UBF2 871 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 RUVBL1Q9Y265 456 aaKnown RBP13.67□□□□□ -0.22
CBWD3-217ENST00000621474 DYRK1BQ9Y463 629 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
CBWD3-217ENST00000621474 A8MT66 165 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 K7EPI3 171 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 MEN1O00255 615 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 KLK10O43240 276 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 GLRA3O75311 464 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 ERLIN1O75477 346 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 STATHP02808 62 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 CREB1P16220 341 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 WT1P19544 449 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-217ENST00000621474 F8A1P23610 371 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 CRHR1P34998 444 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 STAT5AP42229 794 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 RPS15AP62244 130 aaKnown RBP13.66□□□□□ -0.22
CBWD3-217ENST00000621474 PCDH1Q08174 1060 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 TNFAIP8L3Q5GJ75 292 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 ATG9BQ674R7 924 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 VASH2Q86V25 355 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 ESX1Q8N693 406 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 WDR34Q96EX3 536 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 GBP5Q96PP8 586 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 MACROD1Q9BQ69 325 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 OPTCQ9UBM4 332 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 DCDC2Q9UHG0 476 aa13.66□□□□□ -0.22
CBWD3-217ENST00000621474 BSNQ9UPA5 3926 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 TRBC2A0A5B9 178 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 G3V2L1 256 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 STX16-NPEPL1H3BU86 382 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 STX16O14662 325 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 WFS1O76024 890 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms